Pseudoliparis swirei (Mariana hadal snailfish): 130204432
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Entry
130204432 CDS
T09868
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130204432
04082 Neuroactive ligand signaling
130204432
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130204432
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130204432
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
130204432
NCBI-ProteinID:
XP_056287139
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Position
14:complement(4700489..4722161)
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AA seq
467 aa
AA seq
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MVVMDLHSALSNKVSRISVMARLVLSLLLLCGCQNSCCETSTEKEEAANDNSTVFTRILD
GLLDGYDNRLRPGLGENVTEIKTNIFVTSFGPVSDTEMEYTIDVFFRQSWKDERLCFKGP
MEMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGTLLYTMRLTISAECP
MQLENFPMDAHACPLKFGSYAYPVSEVVYTWTKGASKSVVVAEDGSRLNQYHLIGQNAGT
ENIHTSRGQYTVMMAHFFLKRKIGYFVIQTYMPCFMTVILSQVSFWLNRESVPARTVFGV
TTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGK
KALEAQHPKKRDPAVLSKKPNNVCSAGVNYTPNLTKDVSISTISNTTAVQLRAAETKAAD
PKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPVLKGVSST
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggatctgcattcagctctgagcaacaaagtgagcagaatctcagtcatg
gcgaggctcgtcctgtccctgctgctcctgtgcggatgccaaaatagttgctgcgagacc
tccacggagaaggaggaggcggccaacgacaacagcaccgttttcaccaggatcctggac
gggctcctggacggctacgacaacaggctccggccggggctgggagagaacgtcacagag
atcaagacgaacatcttcgtcaccagcttcggcccagtgtcggacacggagatggaatac
accatcgacgtcttcttccgccagagctggaaggacgagcgtctgtgcttcaaagggccg
atggagatgctgccgttgaacaacctgctggccagcaacatctggacgcccgataccttc
ttcctcaacggcaagaagtccatcgctcacaacatgaccacgcccaacaagctgctgagg
ctgcaggacgacggcacgctgctctacaccatgagactgaccatatcggcggaatgcccc
atgcagctggagaatttccccatggacgcacacgcctgcccgctcaagtttggcagctat
gcctatccggtgtctgaggtggtctacacctggaccaagggagcgagtaagtctgtggtg
gtggcagaggatggctccagactcaaccagtaccacctcatcgggcaaaacgccggcacc
gagaacatacacacgagcagagggcagtacacagtgatgatggcccacttcttcctgaag
aggaagattggatattttgtcatccagacgtatatgccctgcttcatgacagtgattctg
tcccaggtgtcgttttggctaaacagagaatcggttcccgcgaggaccgtcttcggggtg
accacggtgctgaccatgaccaccctcagcatcagcgcccggaactcgctccccaaagtg
gcctacgccacggccatggattggttcatcgccgtctgctacgccttcgtcttctccgcc
ctcatcgagttcgccacggtgaactacttcaccaagaggagctgggcctgggacggcaag
aaggctctggaggcgcagcaccccaagaagcgggaccccgcggtgctgtccaaaaagccc
aacaacgtttgctcggcgggcgtcaactacacccccaacctcaccaaggacgtgtccatc
tccaccatctccaacaccacggcggtgcagctccgggccgccgagaccaaggcggcggac
cccaagaagacctacaacagcgtcagcaagatcgacaagatgtcgcggatcgtgttcccc
gtcctgttcggaaccttcaacctcgtctactgggccacgtacctcaaccgagagccggtg
ttgaaaggagtgagctcaacgtaa
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