Pseudoliparis swirei (Mariana hadal snailfish): 130204458
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Entry
130204458 CDS
T09868
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
130204458 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pswi03400
]
130204458 (nhej1)
DNA repair and recombination proteins [BR:
pswi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
130204458 (nhej1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
UMPH-1
Motif
Other DBs
NCBI-GeneID:
130204458
NCBI-ProteinID:
XP_056287179
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Position
14:complement(1471608..1478726)
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AA seq
312 aa
AA seq
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MEARGADALLQRPWLPVSIGGCRLLAKSCFGEAAYRLLLTDGSCVWEERMDSAAIQRRAQ
ELNRRLRAKVEAFFSHLCEVAQPCLTGSDGQADGETQISLTRQEDGNIAIKLKSELVGLP
FYWEFHCTPAPVTVACAQLVRPLLAMSHLLQWQVEQLGSLLGRKDAEIQDYRENGAVLSR
ERLQTDVFVEKTYREDFMTKALPLLPADRSGPLGLDADLRRLYAVVVAHDNARKRSSDQR
PAEEEEEADAAASSGGADPGAGGPGDAAAAAKMANRPAEQQVGPTEEKPRPVSRTAERAS
SKPKKKKVGLFR
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagaggagccgacgccctcctgcagcgcccctggctccccgtgagcatcggc
ggctgccggctgctcgccaagagctgcttcggggaggcggcgtaccgcctcctgctgacg
gacgggagctgtgtgtgggaggagaggatggactccgccgccatccagaggagagcgcag
gagctgaacagacgtctgcgggccaaggtggaggcgttcttctcccacctgtgtgaggtg
gctcagccctgcctgacaggaagtgacgggcaggccgacggcgagacccagatctccctg
acgcgccaggaggacggaaacatcgcgattaagctgaagagcgagctggtggggctgccc
ttctactgggagttccactgcacccccgcccccgtcactgtggcatgtgctcagctggtg
cgccccctgctggcgatgagccacctgctgcagtggcaggtggagcagctgggaagtctg
ctggggaggaaagatgcagagatccaggactacagagagaacggagcggtgctcagcaga
gagcggctgcagacggacgtctttgtggagaaaacgtacagagaggacttcatgacaaag
gctcttcctctgctccctgctgaccgctccggccctctgggcctcgacgccgacctccga
cgtctgtacgcggtcgtcgttgcccacgacaacgcccgcaaacggtcttcggaccagcgg
ccggcagaagaagaagaagaagcggacgccgcggcgtcttcaggtggagccgaccccgga
gcaggcgggccgggggacgccgctgccgcagccaagatggccaacagacctgcagagcaa
caggtcggacccactgaagaaaagcctcgaccggtgtccagaactgcagagcgagcgtcc
tccaaaccaaagaagaagaaagtgggcctgttccgatga
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