Pseudoliparis swirei (Mariana hadal snailfish): 130204581
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Entry
130204581 CDS
T09868
Name
(RefSeq) gamma-aminobutyric acid receptor subunit gamma-3 isoform X1
KO
K05186
gamma-aminobutyric acid receptor subunit gamma
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04080
Neuroactive ligand-receptor interaction
pswi04082
Neuroactive ligand signaling
pswi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130204581
04082 Neuroactive ligand signaling
130204581
04519 Cadherin signaling
130204581
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130204581
Ion channels [BR:
pswi04040
]
Ligand-gated channels
GABA-A
130204581
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
FLP21
Motif
Other DBs
NCBI-GeneID:
130204581
NCBI-ProteinID:
XP_056287386
LinkDB
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Position
14:complement(4646343..4699214)
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AA seq
459 aa
AA seq
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MTIKSGVILFILLAQGARSDPLDYGADDEDPNDASVNQMLVPRSHHEDATRILNNLLKEY
DKTLRPDIGVKPTVIDVGIYVNSIGPVSSIDMEYQIDIIFAQTWVDTRLRFNSSSRRLTL
NSNMVGLIWLPDTIFRNSKNADTHWITTPNQLLRIWNNGKVLYTLRMTINAECQLQLHNF
PMDEHSCPLVFSSYGYPRDEIIYKWSRNSVETSDQKYWRLYQFAFMGLRNTTDMLTTTAG
EYVVLSVYFDLSRRMGYFTIQTYIPCILTVVLSWVSFWIKSDATPARTALGITTVLTMTT
LSTVARNSLPRVSYVTAMDLFVTVCFLFVFAAMIEYAMINYYSYSIGRPPAKMQRMGDMS
LCRPVQAYSSFKVGHAPRSMMPVGNSLFWQDYDDNCLYECLDGKDCKSFFCCYEECKEGG
WRKGRIHVDICELDAYSRVFFPTSFLLFNIVYWVSYLYL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcaagtccggggtcatcctcttcatacttctggcgcaaggtgctcgttctgat
ccactggattatggcgccgacgacgaggatcccaacgacgccagtgtcaaccagatgctg
gtccccaggtcgcaccacgaggacgccacgcgcatcctcaacaatttgctgaaggaatac
gacaagacgctgcggccggacatcggagtgaagcccacagtcatcgatgtgggcatatac
gtcaacagcatcgggcctgtgtcatccatcgatatggagtaccagatcgatatcatcttc
gcccagacctgggtggacacccgtctgcggttcaacagcagcagcaggcggctaaccctc
aacagcaatatggttggcttgatctggctgcccgacaccatctttaggaattccaagaat
gccgacacccactggatcacgacgcccaaccagctgctccggatctggaacaatgggaaa
gtgctctacacgctgaggatgaccatcaacgcagaatgccagctgcaactccataatttc
ccaatggacgaacactcctgtcccctcgtcttctccagctacggctacccgcgagacgag
atcatttacaagtggagccggaactcggtggagacctcggaccagaaatactggaggctt
taccagtttgccttcatggggctcaggaacaccaccgacatgctcacgaccacagcaggt
gaatacgtggtgctgagcgtgtactttgacctcagcagaagaatgggctactttaccatc
cagacctacatcccctgcatcctgactgtggtcctctcctgggtctccttctggatcaag
agcgacgccacgcccgcccggacggccttaggtatcaccacagtgctcaccatgaccacg
ctgagcaccgtggccaggaactcgctccccagggtgtcctacgtgacggccatggacttg
tttgtcaccgtctgcttcctgtttgtctttgccgccatgatcgagtacgccatgatcaac
tactactcctacagcataggcagacctcccgccaagatgcagaggatgggggacatgtct
ctctgtcgtcccgtgcaggcctactcgtctttcaaggtaggccacgcccctcgctccatg
atgcccgtgggcaactctctgttctggcaggactacgacgacaactgcctgtacgagtgc
ctggacggcaaagactgcaagagcttcttctgctgctacgaggagtgcaaggagggcggc
tggaggaaaggacgcatccacgtcgacatctgcgagttggacgcctactcgcgggtcttc
ttccccacctccttcctgctcttcaacatcgtgtactgggtcagctacctctacctctag
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