Pseudoliparis swirei (Mariana hadal snailfish): 130204587
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Entry
130204587 CDS
T09868
Symbol
zc3h13
Name
(RefSeq) zinc finger CCCH domain-containing protein 13
KO
K22909
zinc finger CCCH domain-containing protein 13
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130204587 (zc3h13)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
130204587 (zc3h13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
130204587
NCBI-ProteinID:
XP_056287390
LinkDB
All DBs
Position
14:complement(6112558..6122496)
Genome browser
AA seq
1874 aa
AA seq
DB search
MSKIRRKVTVENSKTISDSSSSSSTTTSSTSNPAGPSRRPSVFERLGPSTGTNAPESHCR
NWLKTGNCSYGTTCRYTHGTQPRGKGFSFSRSAERPTGDLRERMKNKRQDVDPENVKRDL
DEPTSPTARQRDSSRGRHREKEDIKITKERTPASEEEPTEWEANREDSDIGDYDYELSLE
MKRQKIQRELMKLEQENVDKREEIVIKKEEAPTKTRATAMPKASPEPLSKQDSPVSRKSS
GSPKHKRGTKGPSSGKKEKKALVPSPVSESTRPSKGSHSKKKGPRTPSPPPPVPLDIPVV
GKKHKGKHKNKEKSEEKQKEAKDQGRDTERHKEKKEKRRDRSDSSHKAKRSLTSEERSGS
VSSPSRGTSPPVRKQSPSPKASSHKTPTLASPPRRSPSPPRHQRTPTPTHNHSPSSHSDS
SAQRHSSSPRRRRSSSPSYHRSSTAAPMSASSPPSSRRSRSPPASHGASSPHRRSDRSSP
SQRHSRGRERSRGERERSPPAQERKQERRDESRSKREKERDDRDYDSEQVSSRDARDDRE
TREARERRDTRERGRETTRDSRDNRDNRDVKDSRESRAETRSSRESLERRDRERERERDR
EKEREKEKEREKDKDREREKERERERTDTHKKEEPAQEDRSYGRGHGREDGGRAEAKTEN
KTDRTERNGRGRGRANETSDKGTNRNSRGSQLESSHDNWESRSSAVRERSVERSTDRSAT
ERSSERGSDRDRYEGDRRGEQARDSSYDRRGGHGERERERRDIRERDQRAASPNRHQGRS
DESEREERREDRRTDRTEERRDDRPRDREREREREREREKEKDREKEREKEREKEAERAR
EREREREREREREREREREEREREREERERERERKEREREREREREREQREQRERERQRE
WEERGRGREERRERRDDTREDRTVRDTRDDRKTSRKRPRVESSLSPRASPKRATRDHSPA
DSDGYNSAEEKSERPIGRGQAKLHPQPLLPSPASLQPPDGADKNRMLSQVVRPLEPLLRS
PPVAAPSDEKPKKDEERRGAGDKREARNRHEDPEPRGERSRGADRRAEPLADTPSESRGR
VRDQRESTPPPPPPPPPPPTPSALVTGSEDRDTAGSQSHEEGKKKTKSQRKGLKKGRKEE
VVGGNIVAAVGDRFKTEPPISGAIDATPPIHSPKKGAKKKVLERKRKRSREEESDVSEED
LSAPQPLNKRKRGPRTPPPSMRPDHRGTGANPEPTPLSKMDNISDWSDDDVADRAAPVET
QAPLVPAEPLKRAVGPRVGRDRERCHPPLPIAPLLPQDPPMMLPTLAPQPLMSQALLRKL
PPDQTRSSSMGSNQSRTSSRRLRSPSNEPARRDDPQCPRPRRGRLQGANSRDRERERERP
VVTEPPGVERKSRIDQLRRGEPGRSTSSDRQDSRSHSSRRSSPDSEKQARSGSRAGSYDS
RERERDREPFERERDRKDLRPPQQQQPPPPPQQQQQQQQQQQQQQPLLLQPPLQQQRDWE
PEPREWPNRVREPLLMRPGRELLMRERDIRERERLLPEGLMQQQHERERERERDGRGDRG
DRMMMDLPPHGDPRAPGRGDLRADVRGDLRGDVIRQERSEYEPLLPREAFSPPELEKPSN
SHHLPGEQRELEKTDSIEGDDDGKENDGQSVASVGEEYEPISDDELDEILADSQKKEDQQ
DDEKITGPLDVIDVDWSSLMPKTKPEPRAAGAALLRFTPGAVLLRAGISKRLAGPELLEQ
VREVCKSELDDPKDADKLFEHDLGALNMAALNRRMERAGLLRNLGPCCKALCARRDFAIR
RQLLKNDKGQTKHYPATPVVDTELLQMSMRLFRRTMAGPAAGPERPQGGSAPAAEGVPTG
GSTLGAAQPEVCAS
NT seq
5625 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaggcggaaggtaacagtggagaattcaaaaaccatatctgatagcagc
agcagcagcagtaccacgaccagcagcaccagcaaccccgccggcccgtcccgccggccc
agtgtgtttgaaagacttggacccagcactgggactaatgctcctgagagtcactgcaga
aattggctgaagaccggcaattgcagttacggcaccacttgtcgctacacacatggaact
cagccacgaggcaaaggatttagcttcagccggtcagccgagagacccacaggtgatctg
cgggagaggatgaagaataaaagacaggatgttgacccagaaaatgtaaagcgagacctc
gacgagcccacatcccccacagcgagacaaagagactcctccagaggccgacacagggaa
aaggaggatataaagatcacaaaggagcgcaccccagccagtgaagaagagcccacagag
tgggaagccaatcgcgaagactctgatatcggtgactacgactacgagttatctctcgag
atgaagcgacagaagattcaacgtgagctcatgaaattggagcaggagaacgtggacaag
agggaggagattgtcattaagaaagaagaggcccccaccaaaacaagagccaccgccatg
ccgaaggcctccccagagccgttaagcaagcaagattcacctgtatccaggaagtctagt
ggatccccaaaacacaaacgtggtaccaaaggtccaagctctggaaagaaagagaagaag
gccctcgtgccctcacctgtttcagaatctaccaggccttcaaaagggagccacagtaag
aagaaagggcccaggacccccagtcctcctcccccagtccctctagatattcctgtcgtt
gggaagaaacacaaaggcaagcacaagaacaaggagaagtctgaggagaagcagaaagag
gcgaaagaccaggggcgtgatacggaaagacacaaagagaagaaggagaaacgcagggac
cgatcagacagttcccacaaggccaagcggtcgttgacatcggaggagcgttccggtagt
gtgtcatctccctccaggggcacttcaccccccgtcaggaagcaatccccctctccaaaa
gcttcgtcccataagacccccacactggcctcccctcctcgcaggtcaccctctcctcca
cgccaccagcgcacccccactcctacacacaaccactccccctcctcccactcagattcc
tctgcccagcggcactcttcgtctcctcgccgccgccgctcgtcctctcccagctaccac
cggagcagcacggcagccccgatgtctgcctcctcccctccgagctcccggcgctcccga
tcaccccccgcctcacacggcgcctcctctccccaccgccggtctgaccgatcgagcccc
agccagcgccactccagggggcgtgagaggagccgcggtgaaagggagaggagtccgcct
gctcaggagcgcaagcaggagcgcagagatgaaagccgcagcaagcgagaaaaagaacgc
gatgatcgggactacgactctgaacaggtctcatcacgggacgctcgcgatgaccgggag
acgagagaggcccgcgaacgacgggacactcgcgagcgaggaagggaaacgactcgagac
tctcgtgacaatcgagacaacagggacgtaaaggactccagagagagcagagccgagacc
cgctccagtcgagagtcgctggagcgccgggaccgtgaacgggaacgagagagggaccgg
gagaaggagagggagaaagaaaaggagagggagaaggacaaggacagagagcgagaaaag
gagagagagagagagaggactgacacccacaagaaggaggaaccggcccaagaggacagg
agttatgggagaggtcatggacgagaagatggagggagagctgaagcaaagacggagaac
aagacggacagaactgagagaaatggacgagggagagggcgtgctaatgaaacttctgat
aaaggcacaaacaggaactcccggggttcccagctggagagcagccatgacaactgggag
tcacggagcagcgcggtgcgtgaacggagtgtagagaggagtaccgatcgcagtgctacc
gaaaggagctctgagaggggctcagacagagaccgctatgagggcgacaggagaggagag
caggccagagactcttcctacgacaggagaggagggcacggagagcgcgagcgcgagcgc
agagacatccgagagagagatcaacgagcagcttcacccaatagacaccaggggaggtca
gatgagtcagagagggaggagaggagggaggaccgcaggacagatagaacagaagagagg
agagacgacaggccccgtgaccgggagcgagagagagaaagggagcgggagagggagaag
gagaaggacagagagaaggagagggaaaaggagcgagagaaggaggcggagcgggccagg
gagagagagcgggagcgggaacgagagagggagagagagagggaaagggaacgggaggag
agagagcgggagagggaggaacgggagagggagcgggagagaaaggagcgagagagggag
agggagcgagagcgagagagggagcagcgagagcagcgggagagggagaggcagcgggag
tgggaggagcgagggagaggacgagaggaaaggcgggagaggagagatgacaccagggag
gaccgaactgtcagagacacccgggatgaccgcaagacgagtcgcaagaggcccagggta
gagagcagcttgagccccagagcctcgcctaaacgagcgactcgggaccacagtccggca
gacagcgacggctacaacagtgcagaagagaaaagtgaacgcccgattggccgagggcag
gccaagctccacccacagcccctcctccccagcccagcgtctctgcagccgcctgacggt
gctgacaaaaatcgcatgctgagccaggtggtgcggcccctggagcccttgttgcgttct
ccaccggtggctgctccgtccgatgagaagcccaagaaggatgaggagcgcagaggagcc
ggagacaaaagggaagcacgcaaccgccacgaggacccggagcctcgtggggaacggagc
agaggagctgaccgacgagcagagcccctcgcggacaccccgtccgaatctcgtggccga
gtcagagaccagcgagagtccacgccccctccgccgccgccgccgcccccgccccccact
ccttcagctctcgtcactggcagcgaagacagagacactgccggttcccagtcccacgag
gagggtaaaaagaagacaaagtcgcagaggaagggactgaagaagggtcgtaaggaagag
gttgtaggtggcaacattgtggcagctgtgggagatcgtttcaagaccgagccccctatc
agcggtgcaatagatgcaactccgcccatacactcgcccaagaaaggagccaagaagaag
gtgcttgagcgaaagaggaaacggtcacgagaagaagaatcggatgtgtccgaggaagat
ttatctgcccctcagcctcttaataagaggaagcgagggcccaggacgccaccgccgtca
atgaggcccgatcatcgtggtactggagccaacccagagccaacgcctctgtccaaaatg
gacaacatcagtgactggtcagatgatgatgtcgcagaccgagcagcaccagtggaaaca
caagctccactggttccggctgagcctctgaagagggctgttggtcccagagtgggcagg
gacagggagcggtgccatcctcctctccccatcgcccctctgctcccccaagaccctccg
atgatgctgccgactctggccccgcagcccctcatgtcccaggccctgctccgcaaactt
cctccggatcagacgcgcagcagcagcatggggagcaaccagagtcgcacttcatccaga
cgcctgcgatcgccctccaacgagcccgcccgccgagatgacccccaatgtccacgaccc
cgccgaggaaggctccagggggccaactctcgggaccgagagagggaaagagaaaggccg
gtcgtgactgagcctccaggggtcgagaggaagtctcggattgaccagttgaggagggga
gagcccggccgcagcacctcctcagaccggcaggattcacgcagccacagctccaggcgc
agctcccctgactctgagaagcaggccaggtcagggtcccgtgccggatcctacgacagt
cgagaacgggaaagagacagggagccgtttgagcgggaacgagaccgaaaggacctccgg
cctccgcagcagcagcagcctcctcctcctccgcaacaacagcagcagcagcagcagcag
cagcagcagcagcagcccctgctcctccaaccgcccctacaacagcagagagactgggag
cctgaacctagggagtggcctaacagggtacgggagcccctgctgatgcgtcctggccgg
gaacttctcatgagggagcgagacatcagggagagagaacgcttactccccgaaggactc
atgcagcagcagcacgagcgagagagggagcgcgagagagacggtcgaggtgaccgagga
gaccgaatgatgatggacctgccgccccacggggaccccagggccccgggacgaggtgac
ctgagggctgacgtacggggagacctgcgaggtgacgttataagacaggagagaagcgaa
tatgagcctctgctgccaagagaagccttcagccctccagagctagagaaaccaagcaac
agccaccatctcccgggagagcagcgagagctggagaagaccgacagcatcgaaggagac
gatgatgggaaggaaaacgatggccagtcagtcgcatctgtgggagaggagtatgaacca
atcagtgatgatgagctggatgaaattttggctgacagccagaaaaaagaggatcagcag
gacgacgaaaaaattacaggtcctctagatgtaattgatgtggactggtccagcctgatg
cccaaaacgaagccggagccccgggcagcaggggcagcgttgctccggttcaccccaggc
gccgtgctgcttagggcgggaatctccaagcgcctcgctgggcctgagctcctggagcaa
gtcagagaggtgtgcaagtctgagctggatgaccccaaagatgctgacaagctgtttgag
catgacctgggggctctgaatatggcggccctgaacaggcggatggagagggcaggcttg
ctgagaaatctcgggccctgctgcaaggccctgtgtgcccgcagggactttgccatccgc
cggcagctgttgaaaaatgacaagggccaaaccaagcattaccccgcgacgcccgtggta
gacaccgagctgctgcagatgagcatgcgtctcttcagaaggaccatggccggcccggcc
gcgggcccagagcggccccaaggtgggtcggcaccagcggcagagggcgttccaactggt
ggtagtacgctcggcgcagcacagccggaggtgtgtgcgtcctag
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integrated database retrieval system
