Pseudoliparis swirei (Mariana hadal snailfish): 130204589
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Entry
130204589 CDS
T09868
Name
(RefSeq) ras-related protein Rab-9A-like
KO
K07899
Ras-related protein Rab-9A
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204589
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pswi04031
]
130204589
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab GTPases
130204589
GTP-binding proteins [BR:
pswi04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
130204589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
RsgA_GTPase
Gtr1_RagA
AAA_16
AAA_7
FeoB_N
Motif
Other DBs
NCBI-GeneID:
130204589
NCBI-ProteinID:
XP_056287392
LinkDB
All DBs
Position
14:complement(9047637..9050989)
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AA seq
200 aa
AA seq
DB search
MSKSTLLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNRELEVDGRHVTLQIW
DTAGQERFRSLRTPFYRGSDCCLLTFSVDDGQSFSNLANWKKEFTYYADVKEPDGFPFVV
LGNKLDVAERQVSGEDARQWCRENGGHPYFETSAKDATNVASAFEEAVRRTLASDDRADH
LIHNNTVDLQRKSHPDSTCC
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagtcgaccctcctgaaggtcatcctcctgggcgacggcggagttggcaagtcg
tcgctcatgaaccgctacgtcaccaacaagttcgactcgcacctcttccacaccatcggc
gtggagttcctcaacagggagctggaggtggacggccgccacgtcaccctgcagatctgg
gacacggcgggccaggagcgcttccgcagcctccgcacgccgttctaccgcggctccgac
tgctgcctgctcaccttcagcgtggacgacgggcagagcttcagcaacctggccaactgg
aagaaggagttcacgtattacgccgacgtgaaggagccggacggcttccccttcgtggtg
ctgggcaacaagctggacgtggcggagcggcaggtttcgggggaggacgctcggcagtgg
tgccgcgagaacggcggccacccgtacttcgagacgagcgccaaggacgccaccaatgtg
gcgtcggccttcgaggaggcggtgcggcgcaccctggcgtcggacgaccgagcggatcac
ctcatccacaacaacacggtggacctgcagaggaagagtcaccccgactccacctgctgc
tga
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integrated database retrieval system
