Pseudoliparis swirei (Mariana hadal snailfish): 130204703
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Entry
130204703 CDS
T09868
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like isoform X1
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130204703
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130204703
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
HECT type E3
130204703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
Motif
Other DBs
NCBI-GeneID:
130204703
NCBI-ProteinID:
XP_056287624
LinkDB
All DBs
Position
14:complement(9969612..10009033)
Genome browser
AA seq
1548 aa
AA seq
DB search
MEMAASPSSQSSSSSANSSAREHLLAVRRRTPHTRPYTIGPDNLRSLSAQGTAGEVVASV
PSTSLGSQPEAVGVGLQRANSDTDLVTSDSRSSLTVSKYQLTLGQSHLVISWDIKEEVDA
TDWIGLYHIDETCMANVWDSKNRGVNGSQRGQIVWRLEPEPYFMEPETKVCFKYYHGVSG
ALRATTPCITIKNPGVPVGSEGQVEDQSGTEHCRKLVSFTLSGIRAVSLKKGMFFNPDPY
LKMSIQPGKRSGLPRFTHHGQERRSSIIANTTNPVWHGEKYTFVALMTDVLEIEVKDKFA
KSRPIIKRFLGQLIMPVQRLLEGPATDDQPVSYSLCRRLPMDHVSGQLSFRVVVTATGHE
EASPQAVGVHLGAVNGDPGSPSDDEDLPHQSSSSRFTYRPSPTGPDEGSRLVNGACYNSD
DSIWQEPGQMGQEDPLARGLGCHTHRQVSLNDYLDTIEAPRSPRDRPFVGPSPKLRSSFP
TDTRLNTMLHIDSDEDEETAGQHREQSQETRTQQSTDLALSRRWAESQQGNEGSKGEPEG
QTGLGAGATTDAGFSASAQSGSESAGAEPVDEAAKAQAGTSTAARTAAGTRKVAGALAEV
APATGATVTALGSSQASGNDVQAVAGSGESVGECTCQEQSSRMAANQEVPSLGLLSPIQE
VETRNIVAPKAEDEGESSSIQANGPVAAAAPVSSIIDNQEGGISEVGSGARASGREEHEV
WSRRQSMQASGGTAQNEDARAAGGSVNGTVGVDRETDWEARIDSHGRIFYVDHVNRTTTW
QRPTAPTAPQTLQRSNSIQQMEQLNRRYQSIRRTITNEGRPEEQPANELLADETDMQPSI
PGNPLIYYIIVYLACKACPRDCVCVAELRRDNSVAQSSPRSRLTLLLQSSSAKFLTSPDF
FTVLHANPSAYRLFTTNTCLKHMISKVRRDAHHFERYQHNRDLVAFLNMFANKQLELPRG
WEMKHDHTGKSFFVDHTGRATTFIDPRLPLQSTRPPSVLSHRQHLTRQRSHSAGEVSPRR
LASEDPRHAGPPVLPRPSSTFTSANRGQCQDVVPVAYNEKIVAFLRQANIFEILQERQTD
FNRNHSLREKVQLIRTDGGSGLARMSGDADLVMLLSLFEDDVMSYVPPHALLHPSYCQSP
RGSPVSSPQNSPGTQRANARAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKLKLIIRRDH
LLEDAFNQIMCYSRKDLQRSKLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYS
ANDTYTVQISPMSAFVDNHHEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLS
DLEYLDEEFHQSLQWMKDNDIEDMLDLTFTVNEEVFGQITERELKPCGANIPVCEKNKKE
YIERMVKWRIERGVVQQTDSLVRGFYEVVDARLVSVFDARELELVIAGTAEIDLSDWRNN
TEYRGGYHDSHIVIRWFWSAVERFNNEQRLRLLQFVTGTSSIPYEGFASLRGSNGPRRFC
VEKWGKVTALPRAHTCFNRLDLPPYPSFSLLYEKMLTAVEETSTFGLE
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggagatggctgcctctccctcatcccagtcgtcctcatcatcggccaacagcagtgcc
cgggagcacctcctggcggtgcgtcgacgcacccctcacacccggccgtacacgattggt
ccagataacctccgcagcctgtcggcacagggcacagccggagaagtcgttgcctctgtg
ccctcgacgtcgttaggaagccaaccagaagcagtgggagttgggctccagcgggccaac
agcgacacagacctggtgacatcagacagccgctcatcacttacagtgtctaagtaccag
ctgactctaggccaaagccatctggtaatctcctgggacatcaaggaggaagtggatgcc
accgactggatcggcttgtaccacatcgatgagacgtgcatggccaacgtgtgggactcc
aagaatcgtggagtgaatggcagccagagaggacagatcgtgtggagactggagccggaa
ccctacttcatggagccggagactaaggtctgctttaaatactatcacggtgtgagtgga
gcattgagggcaactacaccttgtatcaccatcaagaaccctggagtaccggtgggcagt
gaaggccaagttgaggaccaatcaggcactgagcactgtcgtaaactcgtcagcttcacc
ctatccggtatacgggcagtaagtctgaagaagggcatgttcttcaaccctgacccctac
ttgaaaatgtcaatacagcccgggaagaggagcggcctccccagattcacccaccacggc
caggagagacgctcctccatcatagccaacacaaccaaccctgtgtggcacggggagaaa
tacacctttgtggctctgatgactgacgtgttggagatcgaggtgaaggataagtttgcc
aagagccgaccgatcatcaagcggtttctgggtcagctgatcatgcctgtacagaggctt
ctggaggggccggccaccgatgatcagccggtcagctatagcctgtgtcgtcgtctccct
atggaccacgtgagcgggcagctctcgttcagggtggttgtcaccgccactggacatgaa
gaagcctccccacaggctgtgggagtccacttaggtgcagtgaacggtgatcctggaagc
ccctcagacgacgaagacctccctcaccaatcctcctcttcacgcttcacatacagacct
tctcccacaggccctgacgaaggctccaggttagtcaatggggcttgttacaatagcgat
gacagtatatggcaggagcctgggcagatgggacaggaagatccgcttgctaggggtctg
ggctgtcacacccaccggcaagtgtcgctcaacgactacctggacaccatcgaggctccg
agaagccccagggaccgacctttcgtagggccctcgccgaaactccgctccagctttcca
acagacacgcggctaaataccatgctgcacatcgactcagatgaggatgaggagacggcg
gggcagcaccgagagcaatcccaggagacgaggacacagcaaagtacagacttggcctta
tcgaggagatgggctgagtctcaacagggcaacgagggttcaaaaggagagccagagggg
cagactggacttggagctggggccacaacagacgcaggtttctctgccagtgctcagtcc
ggaagtgaatctgcaggggccgaacctgtagatgaagctgccaaagcacaagcaggaacg
tccacagcggccaggactgcagctgggaccagaaaggtggctggagcattagcagaggtt
gcacctgccactggagcaacggtgacagctctgggctcatctcaggcatctgggaatgat
gtacaagcagtagctgggtcgggagagtctgtgggggaatgtacctgtcaggagcagagc
agcaggatggcggccaaccaggaggtgccctcacttggtctactttcacccattcaggag
gtggagacaagaaatatagtggctccgaaggccgaggacgaaggggagtcatcaagcatt
caggcaaatggaccagtagcagcagcagctcctgtgagcagcatcatagataaccaagaa
ggagggatttctgaagttggtagtggagcgagagccagcggtcgggaggagcatgaggtg
tggagcaggagacagtccatgcaggcctccggaggcacagcccagaacgaggatgcgcgt
gcggccggagggagtgtgaacgggacagtcggggtggacagagagacagactgggaggct
cgtatcgacagccatggtagaatcttttacgtggaccatgttaacagaaccacaacttgg
cagcgtcccactgctcccaccgccccgcagaccctccagaggtccaactccatacagcag
atggagcagctgaaccgcaggtatcagagtatacgtaggacaataaccaatgaaggtaga
ccagaggagcagccagccaatgagctgctggcagatgagactgacatgcaaccttccata
ccaggtaatcctctcatctactacattatagtctatctagcctgcaaagcatgtcctaga
gactgtgtttgtgttgcagagctgcgcagggacaacagtgtggctcagtccagtcccaga
tctcgcctcactctgctgcttcagtcctccagcgcgaagttcctcaccagccccgacttc
ttcactgtgctgcatgccaaccctagtgcctaccgtttgttcaccaccaacacgtgtctg
aagcacatgatcagtaaggttcgtcgggatgctcaccactttgagcgctaccagcacaac
agggacctggtggccttcctcaacatgttcgccaacaagcagctggagctgccgagaggc
tgggagatgaagcacgaccacactggcaagtctttctttgtggaccataccggccgtgct
accaccttcatcgacccccggcttcctctccagagcactcggcccccaagcgtcctgtcc
caccgccaacacctgactcggcaacgcagccacagtgccggggaggtcagcccacggcga
ctggctagtgaagacccccgtcacgctggcccacccgtcctgccccgtccttccagcacc
ttcacgtctgccaacaggggccagtgtcaagacgttgtgccagtggcttacaatgagaag
attgttgcgtttcttcgacaagcaaacatcttcgagattttgcaggaaaggcagacggac
ttcaaccggaaccattcactcagggagaaggtgcaactcatacgcacagatggagggtca
ggattggccaggatgtcaggtgatgctgatcttgtcatgctactcagtctttttgaagat
gacgtaatgtcctacgtacctcctcatgccttacttcacccgagctactgccagtcacct
cgggggtcccccgtctcctctccacagaactcacctggtacacagagggcaaacgccaga
gccccagcaccctacaagagagattttgaggccaaactgcgcaacttctataggaaactg
gaaactaaaggctacggccaaggaccagggaagctaaagttgatcatccgtcgtgaccat
ctgctggaagatgccttcaaccagatcatgtgctattcccgtaaagacctgcagcgcagc
aagctctacgtcagctttgtcggggaggaggggttggactacagcgggccttccagggag
ttcttcttcttggtttccagggaactgttcaacccttattatggtctttttgagtactct
gcaaacgacacttacaccgtccagatcagcccaatgtccgcttttgtagacaatcaccac
gaatggttccggttcagtggtcgtattctgggtttggctctaatccaccaatacctgcta
gatgccttcttcaccagacccttctataaaggcctactgcgcattccatgtgacctgagt
gacctagagtacctggatgaggagtttcaccagtcccttcagtggatgaaggacaacgac
atagaagacatgctggacctcactttcactgtcaatgaagaggttttcggacagataaca
gaaagggaactgaagccttgcggagccaacatcccagtatgtgagaagaacaaaaaagaa
tacattgagcgtatggtgaagtggaggatagagagaggagtggtgcagcagactgacagc
ctggtcagaggcttctacgaggtggtggatgccaggctagtatcggtgtttgatgcaagg
gaactggagctggtgatcgccggcacagctgaaattgacttatcagattggaggaacaac
acagaatacagaggaggttaccatgacagccacattgtgatccggtggttctggtcagca
gtggagaggttcaacaatgaacagagactacggcttctgcagtttgtgaccgggacatcc
agtattccttatgagggctttgcttctctgcgaggcagcaatggacctcgcaggttctgt
gtggagaagtggggcaaggtcactgcactacccagagcccatacctgttttaatcggctg
gacctgccaccatacccgtccttctcattgctgtatgagaagatgctgaccgctgtggag
gagaccagcacctttgggctggaatga
DBGET
integrated database retrieval system
