Pseudoliparis swirei (Mariana hadal snailfish): 130204767
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Entry
130204767 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: rho GTPase-activating protein SYDE1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204767
Membrane trafficking [BR:
pswi04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
130204767
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
130204767
NCBI-ProteinID:
XP_056287712
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Position
14:137227..202485
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AA seq
884 aa
AA seq
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MAEPLLKRTFSRLRGKERSRRKTGMSDVAVKADTVLQTSSSPSSPLMKTRPPPAADPGPP
SPQNHFTESKEQLWARPGSAAPPTSIPRDSDWIDQNAPGQSWSHRQSPDEVSEPHLHAPV
GSPSGLLEAPRPPRAPPDAPATSPGQRAYLQSLDRSSRAWVLASGXEACGIQQESNIWYN
PIPEEEDTGGPRREKEIWRSRDETAKRTGSAQRRSELKHVIPFTSYSICLSLTDPATCDD
SSASLKKGGVSGSVIDRLMSPGTMRKLSFKMKKLPELRRKLSLRSRAQRQGGDEPAGKTA
SASAANQNVISRYHLDSSAPPARPLCRSSRGRSAKGGYLSDGDSPELLPRQQAPPLSTSQ
EVAWDMSSFRLYVNSDPPRCSQRVTGLLTVHLLGLEDMKTSRSEDRKEVFLAIQVDGVTR
ARTALLTLRGSSLPLNHAFHLELERAQQLRIVVLTPAAGSGSKSGPGPTRNRVCGLAGVS
IPALFKGCQIQQLCVKLEPRGRLYVKLSLEESWDTQPSIEASGPAHVFGVELHHLVEKEE
STSMIPLLIQKSVAEIERRGLKVVGLYRLCGSASVKKELRDWFERSSSAVCLSDDLYPDI
NVITGQSTGRKLFLCRHVHVALSYVHLRLPRTPLSVGLPRTPLSALQATLALLLDHLSLV
ASLSSSNRMTHQNLAVCFGPVLLTPTQEAWRGGGGGGGGGGGGGKGFSSSEEMASAVDFK
RHIEALHYLLQLWPVPSHRFPADDLPAPSPSPTPALDQDPREQQDWPPALRLAVSPQREV
VVSRRGRGLARLESPPPINRYAGDWSVCGPEAGEEADYDEVAGSGDEEEEKKEVWSGGGG
GGGLYVDQLMDFDAPFNCRLSLKDFDTLILDLDRELAQQSHVCL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccctgctgaagagaaccttctctagactgagaggaaaagagcgatccaga
aggaagaccggaatgagcgatgttgcagtaaaggctgacacggtcctccagacgtcttca
tcaccgtcgtcacccttgatgaagaccagaccccccccagcagcagaccctggtcctccg
tcgccacagaaccacttcacagagtccaaggaacagctgtgggcccggccgggttctgca
gctccgcccacctccatccccagagactctgattggatagaccagaatgcacctgggcag
tcctggagtcaccggcaatcaccggatgaggtatctgaacctcatcttcatgctcctgtg
ggttctccttctggcctcctcgaggcccccaggccccccagagccccccctgatgccccg
gccacgtctcctggccagcgagcttatctgcagagcctggatcgcagcagccgagcctgg
gtgctggcgtctggannagaagcctgtgggattcagcaggagagcaacatctggtacaac
ccgatccctgaagaggaggacacaggagggccacgcagggagaaggagatatggaggagc
agggacgagacggccaagaggacggggtcggcccaaaggcgcagcgaactaaaacatgta
attccgtttacatcatacagtatttgtttgtctctcacagatcccgccacctgtgacgat
agctccgcctccttgaagaaagggggcgtgtcaggtagcgtcattgaccggttgatgtct
cctggtaccatgaggaaactctcctttaaaatgaagaaactccccgagctgcgccgcaaa
ctcagcctgcgctctcgtgcccaacggcagggcggcgacgagccggccgggaagacggcg
tcggcctctgcagccaaccagaacgtgatcagcaggtatcacctggatagctccgcccct
ccagccagaccactgtgccggtcatcgagaggccgctcggcaaaaggaggttatcttagt
gatggggactcccccgagctgctgccacggcaacaggcgcctcctctctcaacttcccag
gaggtggcgtgggacatgagctccttccgactgtatgtgaactccgaccccccgagatgc
agccagcgggtgacgggcttactgacggtccacctgctgggcctggaggacatgaagacc
agcaggtccgaggacaggaaggaggtcttcctggccatccaggtcgacggggtgacgagg
gcccggaccgccctcctgaccctgagaggctcctccctcccactgaaccacgccttccac
ctggagctggagagagcccaacagctccgcatcgtggtgttgacaccagcagcaggatca
gggtctaaatcaggtcctggtccaaccaggaaccgggtctgtggtctggcaggagtctcc
atccctgcactctttaaagggtgtcaaattcaacaactgtgtgtgaagctggagccccga
ggacgactgtatgtgaagctgtctctggaggagagctgggacacacagcccagcatcgag
gcctcggggccggctcacgtgttcggggttgagctgcaccacctggtggagaaagaagag
tccacgtccatgatccctctcctgatccagaagtctgtggcagagatcgagcggcgaggc
ctgaaggtggtgggtctgtacagactgtgtggctctgcctccgtgaagaaggagctcagg
gattggtttgagaggagcagctcagcggtgtgtctgagcgacgacctctaccccgacatc
aacgtcatcacaggtcagtccaccggccggaagctttttctctgtcgacacgtccatgta
gcgctgagctatgttcacctccgattacccagaacacccctctctgtaggattacccaga
acacccctctctgctctccaggccacgctggctctcctgctggaccacctcagcctggtg
gcgtccctcagctcctccaacaggatgacgcaccagaacctcgccgtctgcttcggcccg
gtgctgctcaccccgacccaggaggcctggaggggaggaggaggaggaggagggggaggg
ggagggggagggaagggattcagttccagtgaagagatggcgagtgcggtggacttcaaa
cgacacattgaggccttacactacctgctgcagctgtggccagtgccgagtcatcgattc
ccagcagacgacctccccgccccctccccctcccccacccccgccctggaccaggaccct
cgagaacagcaggactggcctcctgcgctgcgattggctgtgagccctcagagggaggtg
gtggtgtcccgacgggggcggggcctggcccggctggagagccctccaccaatcaaccgc
tacgcaggagactggagcgtctgtggcccggaggccggagaggaggccgactacgacgag
gtggcaggcagtggggatgaagaggaggagaagaaggaggtgtggtccggaggaggagga
ggaggaggtctgtacgtggaccagctgatggactttgacgctccctttaactgccgactc
agcctgaaagacttcgacactctgatcctggacctggaccgagagctggcccagcagagc
cacgtctgcctgtag
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