Pseudoliparis swirei (Mariana hadal snailfish): 130204774
Help
Entry
130204774 CDS
T09868
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00310
Lysine degradation
pswi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
130204774 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130204774 (setdb2)
Enzymes [BR:
pswi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
130204774 (setdb2)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
130204774 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130204774 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Pre-SET
TCR_zetazeta
MBD
GIY_YIG_domain
Motif
Other DBs
NCBI-GeneID:
130204774
NCBI-ProteinID:
XP_056287718
LinkDB
All DBs
Position
14:complement(642604..665001)
Genome browser
AA seq
955 aa
AA seq
DB search
MEENPLEPHDVERAKTFWAEEDVEQVFRGVFEYLEHLKRVLQNSTATEKECVQALRLLEC
LNGPPASQDSVVQVVVGSDELFPADSSPPFNGTCRSAAPPSGPEELLPPLTPVRLQYRPH
TCCQACLPCLPSMPQGAPAFWGQNPLKVPLLCGFKRLSGVPLTGAEPAGPEGGEDWDVLY
KAPCGQSLRNHGDVMRFLLATESCGVLRVDFFTFNPAVQLDPPPPAGARCPEMDLSRGSE
PTPVQLCVGDGGARPAEFRYRKDRWPHGCFLSRGAALFAVCCDCSDGCDDARRCACAARG
GRRYRHHRLPEPSPSGVYECGPWCGCVRARCQNRLVQRGIRVRLQVFQTDGRGWGVRCRD
DLDRGTFVCIYAGVMLQRSRGPAEPAPPKLTRSDLPPDDEVEVVTEWLPPPVLEGRSTVL
EPPQPASPPPHVPVIQRPAGTRDRTLVGAPGDLAPPPGESGDLAPPPGESGDLAPPPGES
GDLAPPPGESGDPPPALERTSAVPGLKRALEVEDVYFLDASKEGNVSRFINHSCQPNLFT
QNVFTDCHDPASPSWPFHQQGGEGRNGCRGQFTMEKLCDVCEVEEAVALYSPQLCYVLDG
FLSVYGLVITAMFLREKFFRTKVKRTEEVLYSDLEGQSSGTYTQLTRPRLTKPRANESSA
PSCGVSRVYECGPWCGCVRARCQNRLVQRGIRVRLQVFQTDGRGWGVRCRDDLDRGTFVC
IYAGVMLQRSRGPAEPAPPKLTRSDLPSDDEVEVVTEWLPPPVLEGRSTVLEPPQPASPP
PHVPVIQRPAGTRDRTLVGAPGDLAPPPGESGDLAPPPGESGDLAPPPGESGDPPPALER
TSAVPGLKRALEVEDVYFLDASKEGNVSRFINHSCQPNLFTQNVFTDCHDPGFPIVAFFT
SRVVKAGTELTWRYCADSQSKQEVPCLCGSNGCRGQFTMEKLCDVCEVEGHGDAR
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaccctttagaaccacacgatgtcgagcgagccaaaaccttctgggccgag
gaggacgtggagcaggtgttcaggggcgtgtttgagtacctggagcacctgaagagggtc
ctgcagaacagcaccgccacggagaaagagtgtgtgcaggccctgcggctgctggagtgt
ctcaacggccctccggcctctcaggactctgtggtccaggtggtcgtcggctcagacgag
ctgttcccggctgactcctccccccccttcaacgggacgtgtcgctcagcagcgccccct
tcaggcccggaggagctcctgcccccgctgacccccgtccggctgcagtaccgcccccac
acctgctgccaggcctgcctgccgtgtttacccagcatgcctcagggcgccccggccttc
tggggtcagaaccccctgaaggtgccgctgctctgcggcttcaagcggctgagcggcgtg
ccgctgacgggggcggagccagccggcccggagggcggggaggactgggacgtcctctac
aaagcgccgtgcggacagagtctccgtaaccacggcgacgtgatgcgcttcctgttggcc
acggagagctgcggcgtcctgcgggtggacttcttcaccttcaacccggcggtccagttg
gacccgccccctccggcgggagcccggtgtccggagatggacctgagccgcggctcggag
cccacgccggtgcagctgtgcgtcggagacggcggcgcccggcccgccgagttccgctac
aggaaggaccgctggccgcacggctgcttcctgtcccgcggcgcggcgctgttcgccgtg
tgctgcgactgcagcgacggctgcgacgacgcgcggcgctgcgcctgcgcagccagagga
gggcgccgctaccgccaccaccggctgccggagcccagcccctcaggggtgtacgagtgc
ggcccctggtgcggctgcgtccgggcccgctgtcagaaccggctggtccagagggggatc
agggtccgcctccaggtcttccagaccgacggccgcggctggggcgtccgatgccgcgat
gacctggaccgcggcaccttcgtgtgcatctacgccggcgtgatgctgcagaggagccgc
gggcccgccgagccggcgccccccaagctcacgaggtccgacctcccgccggacgacgag
gtggaggtggtgacggagtggctgcccccgccggtgctggagggccgcagcaccgtgctc
gagcccccccaacccgcctcgccgcccccgcacgtccccgtgatccagagaccggctggg
acccgggaccggacgctggttggagctccgggtgacctggctccgcctccaggtgagtcg
ggtgacctggctccgcctccgggtgagtcgggtgacctggctccgcctccgggagagtcg
ggtgacctggctccgcctccaggtgagtcgggtgacccgcctccggctctggagaggacg
tccgctgtgcccggcctgaagagggcgctggaggtggaggacgtctacttcctggacgcc
agcaaggagggaaacgtgagccgcttcatcaaccacagctgccagcccaacctcttcacc
cagaacgtcttcaccgactgtcacgacccggcttccccatcgtggccttttcaccagcag
ggtggtgaaggccgcaacggttgccggggccagttcaccatggagaagctgtgtgacgtg
tgtgaggtcgaagaggccgtggccctgtacagcccccagctgtgctacgtcctggacggc
ttcctgtccgtgtacggcctcgtcatcaccgccatgttcctcagggagaagttcttcaga
accaaagtgaagagaaccgaggaggtcctctacagcgatctggagggtcagagctctgga
acctacacccagctgactcgaccacggctaacgaaaccgcgagctaacgaaagcagtgcg
ccctcctgtggtgtctctagggtgtacgagtgcggcccctggtgcggctgcgtccgggcc
cgctgtcagaaccggctggtccagagggggatcagggtccgcctccaggtcttccagacc
gacggccgcggctggggcgtccgatgccgcgatgacctggaccgcggcaccttcgtgtgc
atctacgccggcgtgatgctgcagaggagccgcgggcccgccgagccggcgccccccaag
ctcacgaggtccgacctcccgtcggacgacgaggtggaggtggtgacggagtggctgccc
ccgccggtgctggagggccgcagcaccgtgctcgagcccccccaacccgcctcgccgccc
ccgcacgtccccgtgatccagagaccggctgggacccgggaccggacgctggttggagct
ccgggtgacctggctccgcctccaggtgagtcgggtgacctggctccgcctccgggtgag
tcgggtgacctggctccgcctccaggtgagtcaggtgacccgcctccggctctggagagg
acgtccgctgtgcccggcctgaagagggcgctggaggtggaggacgtctacttcctggac
gccagcaaggagggaaacgtgagccgcttcatcaaccacagctgccagcccaacctcttc
acccagaacgtcttcaccgactgtcacgaccccggcttccccatcgtggcctttttcacc
agcagggtggtgaaggccggtactgagctcacgtggaggtactgcgccgactcgcagagt
aaacaggaagtgccctgtctctgcggtagcaacggttgccggggccagttcaccatggag
aagctgtgtgacgtgtgtgaggtcgaaggtcacggtgacgctcggtaa
DBGET
integrated database retrieval system
