Pseudoliparis swirei (Mariana hadal snailfish): 130204789
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Entry
130204789 CDS
T09868
Name
(RefSeq) high-affinity choline transporter 1-like
KO
K14387
solute carrier family 5 (high affinity choline transporter), member 7
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130204789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130204789
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
130204789
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Gene cluster
GFIT
Motif
Pfam:
SSF
Motif
Other DBs
NCBI-GeneID:
130204789
NCBI-ProteinID:
XP_056287730
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Position
14:2292040..2294604
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AA seq
552 aa
AA seq
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MALNIPGLIMMIAFYLLVLGIGIWASVKSKKMEKNTQAGRLEVSFLANRSVSLVVGVFTM
TATWVGGAFIIGIAEAVYDPTKGLIWNIVPLQMSISFIIGGLFFAKPMRENHYISMMDPF
QRKYGNKLTAFLAIIPLLVEVVWLPPILIALGATMSVVIDLPFSACVWISAAVAITYTVL
GGLYSVAYTDVIQISLVFLSLWLCVPFVLTSGVYTDITETAFNHTQQGSWLGQIQSDDIW
RWIDHFLVMTLGNVAIQDFHQRILSSSSTSTARIICFIAAGAILIIGIPSVLIGAVAAST
DWNSTSYGSPSSYERGEASMVLPIILQNLTPTYIFAFGIGAIAAAAMSSADSLLLSSATI
FTTNIYQTVRSQASDKELQWVIRVSIVATGLVGTSLTHLDSSIMMFWILGSDLTFTIIFP
QLVCVLFVRVSNGYGSAAGYVVAVVMRVLSGEPLFGLPVILHFPGCTLENDVYVQRFPFK
SICMLSALASILVVSYVASLLFNKGILPERWDVFKVKSQEAPPPAERAREAESTTANGDD
KCANEPMLDTKC
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggctctcaatattccaggtttgataatgatgatagctttttacctgcttgtgttggga
atcggcatctgggcctcggtaaagtctaagaagatggagaaaaacacacaagctggacgg
ttggaggtttcttttttggctaaccgcagtgtcagcttggtagtgggagtcttcacgatg
actgctacttgggttggaggtgccttcattattggtattgcagaagcagtctatgacccc
accaaaggtctcatctggaatattgttcctctgcaaatgtccatttcctttatcatcggt
ggactgttctttgcaaagccaatgagagagaaccattacatcagcatgatggatcccttt
cagaggaaatacggaaacaaactgactgcgtttcttgccatcattcctctcttagtggaa
gttgtctggcttcctccgatactgattgccttgggagccaccatgagtgtagttatagat
ctgcccttcagtgcttgcgtctggatctctgctgcggtggcgatcacctacactgttctt
ggaggtctctactcggtggcttacactgacgtcatccagatctcactggtgtttctgagc
ttgtggctgtgtgtccctttcgttttgaccagtggcgtttatactgacatcactgaaacg
gcattcaaccacacacaacagggctcctggctcggccagattcagtctgatgacatctgg
agatggattgatcattttctagtgatgactttgggaaatgtagccattcaggatttccat
cagaggatactgtcctccagctccacgtctacagccaggatcatctgtttcattgcagca
ggagctatcctcattataggaatcccatctgtgctgattggagctgtagcagcttcaaca
gactggaactccacctcctatggctctccttcttcatatgagcgaggggaggcatctatg
gtgttgcccatcatccttcagaatttaaccccaacctacatttttgcctttggcatcgga
gctattgctgctgcagcgatgtcatcggctgactctttacttttgtcttcagccaccatc
ttcaccaccaacatctaccagaccgtcaggagtcaggcatccgataaagagctgcagtgg
gtgatccgtgtctccatagtggctacaggacttgtgggaacatccctcacccacctggac
agcagcatcatgatgttctggatcctgggctcagacctgactttcaccattattttcccc
cagctggtctgcgtcctctttgtcagggtctccaatggttatgggtctgctgcaggctat
gttgttgcagtggtgatgagagttttgagtggagagccgttgtttggcctccctgtgatc
ctccatttcccaggatgcactttagagaacgatgtttatgttcagcgctttcctttcaag
tccatctgcatgctgtctgctctggcctccatcctggtcgtttcatatgtggcctcactc
ctgttcaacaaggggatccttcctgagaggtgggacgtgttcaaggtgaagtcacaggaa
gcaccaccaccagcagagagagccagagaggctgaaagtacaacggctaatggagatgat
aaatgtgccaatgaaccgatgttagacacaaaatgttga
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