Pseudoliparis swirei (Mariana hadal snailfish): 130204876
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Entry
130204876 CDS
T09868
Name
(RefSeq) rab GTPase-activating protein 1 isoform X1
KO
K20284
Rab GTPase-activating protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204876
Membrane trafficking [BR:
pswi04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
130204876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
Motif
Other DBs
NCBI-GeneID:
130204876
NCBI-ProteinID:
XP_056287818
LinkDB
All DBs
Position
15:complement(11633626..11693994)
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AA seq
1087 aa
AA seq
DB search
MDDKVSVGKISVSSDSVSTLNSEDFVLVSRLGDETPSSTNNGSDDEKTGLKVISEEGVSF
KIVGNGSEQQLQRELEDVLMDPSVADIGLRSEKGMDGVCGGDRGPLATTSSPVPPGSDPL
SAQPPKLEMVLPVQTAQESELNERSYRADESSSDGSPGSPILDEDSVVFSQLTYLGCASV
NAPRSELEALRMMSILRGQCQLPLDVTLSVPGVSEGTVRLLDPNASTEIANYPIYKILFC
VRGHDGTPESDCFAFTESHYNAEIFRIHVFRCQIQEAVSRILYSFATAFRRSAKKTVLSC
QQPAPHTPDTDLFTFTVSLEIREDDGKGTFSAVAKDKDKQSFKLRAGMDKKIFIYILQTS
NKELAIERCFGLLLSPGKNVKNSDMHLLDLESMGKSSDGKSYIITGSWNPNTPQFQPVNE
ETPKDKFMYVTTAVDLVITEVEEPVRFLLETRVRVCSPNDRLFWPFSKRNYTETFYLKLR
QMERKERKNPASDTLYEVVSLESETEREKRKTTASPDIMPTGTGTTAPSPPEDDEEEDND
EPLLSGSGDVSKECAEKILETWGDLLTKWHMNLSVRPRQLPALVRSGIPEALRGEVWQLL
AGCHNNDHQVEEYRTLITKESPQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYS
VYDEEIGYCQGQSFLAAVLLLHMPEEQAFSVLVKIMFDYGLRDLFKQNFEDLHCKFFQLE
RLMQEYIPDLYNHFLNVGLEAHMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNV
ALALLKTSKDDLIQTDFEGALKFFRVPVPKRYRSEENAKKLMELACSIKISQKKLKKFEK
EYHTLREQQEQQEPPIERYERENRRLQEANMRLEQENDDLAHELVGSKIALRKDLDNAEE
KADALNKELLLTKQKLVDSEDEKRRLEEESAQLKEMCRRELDKSESEIKKNGSIIGEYKQ
ICTQLSERLEKQQTANRGELEKIRSKVGGCEKCRSLFNKEGRVRAAATTSAGGAETDEEK
EDLKNQLREMELELAQTKLQLVEAECKIQDLEHHLGLAFNEVQAAKKTWFNRTLSSIKTV
TGTKETT
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggacgacaaggtctcggtggggaagattagcgtgtcttcggactcggtgtccactctc
aacagtgaggactttgtcctcgtgtcccggctgggggatgagacgccctcttccacgaat
aacggtagtgatgacgaaaagacaggactgaaggtgatttctgaggaaggggtcagcttt
aagattgtggggaatggaagtgagcagcagctccagagggagttagaggatgtcctcatg
gacccatcggtagctgacatcgggctcagatcagaaaagggaatggacggcgtttgtggg
ggcgaccgtggcccacttgccacgacgtcgtcgcctgtaccgccgggctctgacccgctg
agtgcacagccacccaagttggagatggtgcttcccgttcagacagctcaggagagtgaa
ctgaacgagaggtcgtaccgagcagatgaatcctcatcagatggcagtcccggcagtccc
atcctagatgaggatagcgttgtgttcagccagctgacataccttgggtgtgcctcagtc
aacgccccccggagtgagcttgaggccctccgtatgatgagtatcctcagagggcagtgc
cagctccccctcgatgtcacactatctgtgccaggtgtgtccgaaggcactgtcaggttg
ctggaccccaacgccagcacggagatcgccaactaccctatctacaagattctgttctgt
gtgcgaggccatgatggtacaccagagagcgactgctttgccttcactgagagccactac
aatgcagaaatcttcaggatccatgtgttccgctgccaaatccaagaagcggtgagtagg
atactgtacagttttgccacagcgttccggcggtccgcgaagaagacagttctgtcatgt
cagcagcctgcaccgcacacccccgacactgacttgtttaccttcactgtcagtctggaa
atcagggaggatgatggcaagggcaccttcagtgctgtagcaaaagacaaagacaagcag
agtttcaagctgcgtgcaggaatggacaagaaaatttttatttacatcctgcagacctcc
aataaggaactggctattgagaggtgtttcggtctcctgctcagcccggggaaaaatgtg
aagaacagcgacatgcacctgctagacctggagtcgatgggaaagagttccgatgggaag
tcttacatcatcacaggaagttggaacccaaacacgcctcagttccagcctgtgaatgag
gaaacgcccaaagacaaattcatgtacgtgacgacagcagtggacctggtgatcacagag
gtggaggagccggtccgttttctgctggagacgagggtcagagtctgctccccaaatgac
cggctgttctggcccttcagcaagcgcaactacaccgagaccttctaccttaaactgcga
cagatggagcgtaaggagcgaaagaatcctgcctctgacacactttatgaggtggtgagt
ttggaaagtgagactgagagggagaaacggaagaccacagctagtcccgacataatgccc
accgggactggtaccacggccccttcaccacctgaggatgatgaagaggaagataatgac
gagccgttactcagcgggtcaggtgatgtttccaaggagtgtgccgagaagatcctggag
acctggggggacttgttaaccaagtggcatatgaacttgtcagtgcgtcccaggcagctg
ccagctttggtgcgcagtggcattcccgaggctctccgtggggaggtgtggcagctcctg
gcaggctgccataacaatgaccaccaggtagaagagtaccgcacactcattacaaaggag
agccctcaagacagtgccattaccagggacattaacaggacattcccggctcacgactac
ttcaaagacaccggaggagatggacaagactccctctacaagatctgcaaggcttactct
gtttacgatgaggagattggctactgccagggacaatccttcctggctgctgtgctgttg
ctgcatatgccggaggagcaagctttcagcgtgctggtcaagatcatgtttgattacggg
ctcagggaccttttcaaacagaactttgaagatctgcattgcaagttcttccaacttgag
aggctcatgcaggaatatataccagacctgtacaaccatttcctgaatgtgggtctggag
gctcatatgtatgcctctcagtggttcctcactctgttcacagccaagttccctctttac
atggtcttccatatcattgatctgctactgtgtgagggcatcagtgtgatcttcaatgtg
gccttggcattgctgaagacatcaaaagacgatctgatccaaacggacttcgaaggtgca
ctcaaattctttcgtgtcccggttccgaaaaggtaccgctctgaggaaaacgcaaagaaa
ctgatggagctggcctgtagcattaagatcagccagaaaaagctgaagaaatttgaaaag
gagtaccacaccttgagagagcaacaggaacaacaggagccccccatcgagagatacgag
cgggagaaccgtcgtttgcaagaggctaacatgcgcttggagcaggagaacgacgacctg
gctcatgaactcgtcggcagcaagatcgccctgcgcaaagacctcgacaacgcggaggag
aaggcggacgccctgaataaggagctgctgctgaccaaacagaaattggtggactcagag
gacgagaagagacgcctggaagaagaatcggctcagctgaaggagatgtgcaggcgagag
cttgataagtctgaatctgagataaagaagaacggctcgattattggagaatataaacag
atctgcacccagctgagtgaacgactggagaaacagcagacggccaaccgaggggaactg
gagaagatccggtccaaagttggcggctgtgagaagtgcagaagccttttcaacaaggaa
ggtcgcgtgcgggcggcggcgacgacctcggccggaggggctgagaccgatgaggagaag
gaggacctgaagaaccagctgagagagatggagctggaactcgctcagaccaaactgcag
ctggtggaggcggagtgcaaaatccaggacctcgagcaccacctgggtctggccttcaac
gaagtgcaggcggccaagaagacctggttcaaccggacgctcagctccatcaagaccgtc
actgggaccaaggagaccacctaa
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