Pseudoliparis swirei (Mariana hadal snailfish): 130204878
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Entry
130204878 CDS
T09868
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510
Focal adhesion
pswi04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130204878 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
130204878 (rapgef1b)
BRITE hierarchy
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GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
130204878
NCBI-ProteinID:
XP_056287823
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Position
15:complement(17901085..17946485)
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AA seq
1235 aa
AA seq
DB search
MSGKIESKQGIASPPRLSHSRSRASRDYKRLPVMTGFTHIADSQRSHLSSFTMKLMDKFH
SPKIKRTPSKKGKQLQPEPAAKSTEKPPNKKVSRLEEHEKEVVSALRYFKTIVDKMVVEK
KVLEMLPGSASKVLEAILPLVQVDIRIQHSSALSSCHNRVYQSLANLIRWADQVMLDGID
LEDKENVASVTSVIKAVLDGVKELVKLTIEKQEQPSPTSPNKPAPPPAPTVESSVSPEMP
LIEREQEVSNKTAPAATPAEAASDIPDEDVAPPKPPLPEAKMAELRAQLSADAGQRRPSH
KANPPPALPPKKRQSASSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFLQRRFSGGSQS
YGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTETYDPDYDFLHQDL
SAGENLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPPQQQPEYWTPQPNQTNP
LHSYRLSAPPALPQKKRRSTQTSPFPDAGSRVLYERYPSQYDNLSEEELHPTPPFPLFTP
ISPMPQTNGGLFVAQYIASEHTGVPSSPPPLPEKKSRHILQYMQFVEDYSEPQPSVFYQM
PQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPKQRQLASHSSSPSSSSSSS
LSCHLQPSVAAMEEAGSGLGLSMSVSNSYLSGQASLNTPTSSDQVALTHATVLDGGGGGP
NASLAGSMGSVAVCLPSESCLTGALHSASECTNDEGGEGEYVNLYSSSQANGKLPLSLRE
TITADDVLQDPAPQMPSTNSKEALDKERRQKSTESAESDEEDVDELYLMDHKEIMSRITL
KQESDDGPDVRAGSGDILLVHATETDRRDLVLYCEAFLTTYRTFINPEELIKKLHYRYSR
FCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILKQLMDLVFTLVCNGELSLARVLR
KNILDKVEQRKLLRYTNSLKPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIP
EVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIMKHLRK
LNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCI
PYLGLILQDLTFVHLGNPDLIYGKVNFSKRWQQFNILDSMRRFQQVHYEFKRNDDIVCFF
NEFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagagcaagcaaggaatagcgagccccccgcgccttagtcacagc
cgctcccgagcaagtcgtgattacaaaaggcttcccgtgatgactgggttcacgcacatc
gctgactcgcagcggtcccatttgtcctctttcaccatgaaactgatggacaagtttcac
tctccgaagatcaagaggactccatccaagaagggcaagcaactgcagcccgagccagca
gccaagagtacagagaaaccgccaaacaagaaggtcagccggctggaggagcacgagaag
gaggtggtcagtgccctgcgctacttcaagacaatcgtggacaaaatggtcgtggagaag
aaggtgctcgagatgctcccgggctcggccagcaaggtgctggaagccatcctgcctctg
gtccaggtcgacatccggatacagcacagttcggcgctgtcttcctgccataaccgcgtg
taccagagcctcgccaacctcatccgttgggcggaccaggtgatgctggacggcatcgac
ttggaggacaaggaaaatgtggcgtccgtcaccagcgtcatcaaagccgtcctggatgga
gtgaaggaactggtgaagctgaccatagagaaacaggagcagccgtcacccaccagcccc
aacaagccagcaccaccgcctgctcccacggtggagagcagcgtgtcgccagagatgccc
ttgatagagcgggagcaggaggtctcgaataagacggctccggctgctactcctgcagag
gctgcctccgacataccagatgaggacgtggcccctcccaaacccccccttcctgaagcc
aaaatggcagagctcagagcacagttgagtgcagacgctggccaaaggagaccctctcat
aaggcgaaccctccgccagcgcttcccccgaagaagcgccagtcggcctcttcgccgacg
cgggtggcggtggtcgccccgatgagccgcggctccagcctgccctgcagcgtccacaga
cagcagcaggactacgagcaggagttcctccagaggcggttctccggggggagccagtcg
tacggcggggactccccgcgcctgtctccatgcagcagtatggggaagcttagcaagtct
gacgagcagctctcgtccatggagcaggacagcggtcagtgttctcgtaacaccagctgt
gagacgctagacaacacagagacttacgacccggattatgacttcctccaccaggacttg
tcagctggggaaaacctgcccccgataccggtaggagggtgcctgagccccctgcccgag
tctcacagcgagtcctcgtcccccgtccccggacagcatccctcacatccccgcttcagt
gcgcctcccccacagcaacagcccgaatactggaccccgcagcccaatcaaaccaacccc
ttacattcctaccgcctcagcgcgcccccggcccttccccagaagaagcggcgcagcacc
cagacatcgcccttccctgacgcggggtccagggtgctgtatgaacgctacccctcccaa
tatgacaacttgtcagaagaggagctgcaccctacgccgccattcccccttttcacgccc
atctcccccatgccccagacgaatgggggcctttttgtcgcccagtacatcgccagcgag
catacgggtgtcccctccagcccacctccactgccagaaaagaaaagcagacacatcctc
cagtacatgcagtttgtggaggactactccgagccgcagccctccgtgttctaccagatg
ccccagagtgagagcatctacgagcagcgcaacaagcgcttccaggaggtctacggcttc
aacgactccttcagcagcaccgactcggtccacgagccgctgctgcctccggcattgccc
ccgaaacaaaggcaactggcctcccactcttcctccccctcttcctcctcctcctcttct
ctctcctgccacctccagccgtctgtagcggccatggaggaggcgggctctgggctgggc
ctcagcatgtctgtttctaactcctacctgagtggccaagcttctttaaacacacccacg
agctcggaccaggttgccttgacccacgccaccgttctggatggcggcgggggcgggccc
aacgcttccctcgccggctcaatgggctctgtggccgtctgtcttccttctgagtcgtgt
ctcactggcgctctccactcagcgagcgagtgcacaaatgacgagggcggggagggcgag
tacgtcaacttgtactcctccagccaggccaacggaaagctgccgctctccctccgagaa
acgatcacggctgacgatgtgcttcaagaccccgcccctcagatgccatccaccaacagc
aaagaggccttggacaaggagaggaggcagaagtcaacggagtcggccgagagcgacgag
gaagacgtggacgagctctaccttatggaccacaaggagatcatgagcaggataacatta
aaacaagaaagcgatgacggcccggacgtccgcgcaggatcgggagatattctattagtc
cacgctacggaaacggaccgcagagatctcgttttgtactgtgaagcctttctgacgact
tatcggacttttataaaccccgaggagctcattaagaagctacactacagatacagcagg
ttctgccacagcccggacaccttcaagaagcgggtcagcaagaacaccttctttgtgctg
gtccgtgtggtggatgagctgtgcctggtggagctgacggaggacatcctgaagcagctg
atggacctggtgttcacgctggtgtgcaacggcgagctcagcctcgcccgcgtgctccgc
aagaacatcctggacaaggtggagcagcggaagctgctgcgctacaccaactcactcaag
ccgctcgctgcccgaggggtctccgcgaggccgggaactctccacgacttccgcagtcac
gagattgccgatcagctcactcttctcgacgcggagctcttctataaaatcgagattcca
gaggtgctgctctgggccaaggagcagaacgaggagaagagtcccaacctgacgcagttc
acggagcactttaacaacatgagctattgggtccgctctttgattatccagcaggagaaa
gctcaggaccgagagaagctgcttctcaagttcataaagataatgaagcacttaagaaag
ttgaataatttcaactcctacctggcgatactgtccgctctggactccgcccccatccgg
agattggagtggcagaagcagacctcggagggactggaggaatattgcacattgattgac
agctcctcctccttcagagcgtaccgagctgccttggctgaggtggagcctccgtgcatc
ccgtacctcggtctcattctgcaggacctgaccttcgtccacctggggaaccccgacctc
atctacgggaaggtcaacttctccaaacgctggcagcagttcaacattctggacagcatg
cggcgcttccagcaagtgcactacgagttcaagcgcaacgacgacatcgtctgcttcttc
aacgaattcagcgaccacctggcggaggaggccctgtgggagctgtcgctaaagatcaag
cccaggaacatcaccaggcgcaagacagagcgcgaggagaagacctag
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