KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130204878
Entry
130204878         CDS       T09868                                 
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b
  KO
K06277  Rap guanine nucleotide exchange factor 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04510  Focal adhesion
pswi04910  Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    130204878 (rapgef1b)
 09150 Organismal Systems
  09152 Endocrine system
   04910 Insulin signaling pathway
    130204878 (rapgef1b)
SSDB
Motif
Pfam: RasGEF RasGEF_N
Other DBs
NCBI-GeneID: 130204878
NCBI-ProteinID: XP_056287823
LinkDB
Position
15:complement(17901085..17946485)
AA seq 1235 aa
MSGKIESKQGIASPPRLSHSRSRASRDYKRLPVMTGFTHIADSQRSHLSSFTMKLMDKFH
SPKIKRTPSKKGKQLQPEPAAKSTEKPPNKKVSRLEEHEKEVVSALRYFKTIVDKMVVEK
KVLEMLPGSASKVLEAILPLVQVDIRIQHSSALSSCHNRVYQSLANLIRWADQVMLDGID
LEDKENVASVTSVIKAVLDGVKELVKLTIEKQEQPSPTSPNKPAPPPAPTVESSVSPEMP
LIEREQEVSNKTAPAATPAEAASDIPDEDVAPPKPPLPEAKMAELRAQLSADAGQRRPSH
KANPPPALPPKKRQSASSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFLQRRFSGGSQS
YGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTETYDPDYDFLHQDL
SAGENLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPPQQQPEYWTPQPNQTNP
LHSYRLSAPPALPQKKRRSTQTSPFPDAGSRVLYERYPSQYDNLSEEELHPTPPFPLFTP
ISPMPQTNGGLFVAQYIASEHTGVPSSPPPLPEKKSRHILQYMQFVEDYSEPQPSVFYQM
PQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPKQRQLASHSSSPSSSSSSS
LSCHLQPSVAAMEEAGSGLGLSMSVSNSYLSGQASLNTPTSSDQVALTHATVLDGGGGGP
NASLAGSMGSVAVCLPSESCLTGALHSASECTNDEGGEGEYVNLYSSSQANGKLPLSLRE
TITADDVLQDPAPQMPSTNSKEALDKERRQKSTESAESDEEDVDELYLMDHKEIMSRITL
KQESDDGPDVRAGSGDILLVHATETDRRDLVLYCEAFLTTYRTFINPEELIKKLHYRYSR
FCHSPDTFKKRVSKNTFFVLVRVVDELCLVELTEDILKQLMDLVFTLVCNGELSLARVLR
KNILDKVEQRKLLRYTNSLKPLAARGVSARPGTLHDFRSHEIADQLTLLDAELFYKIEIP
EVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIMKHLRK
LNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALAEVEPPCI
PYLGLILQDLTFVHLGNPDLIYGKVNFSKRWQQFNILDSMRRFQQVHYEFKRNDDIVCFF
NEFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgtcgggaaaaatagagagcaagcaaggaatagcgagccccccgcgccttagtcacagc
cgctcccgagcaagtcgtgattacaaaaggcttcccgtgatgactgggttcacgcacatc
gctgactcgcagcggtcccatttgtcctctttcaccatgaaactgatggacaagtttcac
tctccgaagatcaagaggactccatccaagaagggcaagcaactgcagcccgagccagca
gccaagagtacagagaaaccgccaaacaagaaggtcagccggctggaggagcacgagaag
gaggtggtcagtgccctgcgctacttcaagacaatcgtggacaaaatggtcgtggagaag
aaggtgctcgagatgctcccgggctcggccagcaaggtgctggaagccatcctgcctctg
gtccaggtcgacatccggatacagcacagttcggcgctgtcttcctgccataaccgcgtg
taccagagcctcgccaacctcatccgttgggcggaccaggtgatgctggacggcatcgac
ttggaggacaaggaaaatgtggcgtccgtcaccagcgtcatcaaagccgtcctggatgga
gtgaaggaactggtgaagctgaccatagagaaacaggagcagccgtcacccaccagcccc
aacaagccagcaccaccgcctgctcccacggtggagagcagcgtgtcgccagagatgccc
ttgatagagcgggagcaggaggtctcgaataagacggctccggctgctactcctgcagag
gctgcctccgacataccagatgaggacgtggcccctcccaaacccccccttcctgaagcc
aaaatggcagagctcagagcacagttgagtgcagacgctggccaaaggagaccctctcat
aaggcgaaccctccgccagcgcttcccccgaagaagcgccagtcggcctcttcgccgacg
cgggtggcggtggtcgccccgatgagccgcggctccagcctgccctgcagcgtccacaga
cagcagcaggactacgagcaggagttcctccagaggcggttctccggggggagccagtcg
tacggcggggactccccgcgcctgtctccatgcagcagtatggggaagcttagcaagtct
gacgagcagctctcgtccatggagcaggacagcggtcagtgttctcgtaacaccagctgt
gagacgctagacaacacagagacttacgacccggattatgacttcctccaccaggacttg
tcagctggggaaaacctgcccccgataccggtaggagggtgcctgagccccctgcccgag
tctcacagcgagtcctcgtcccccgtccccggacagcatccctcacatccccgcttcagt
gcgcctcccccacagcaacagcccgaatactggaccccgcagcccaatcaaaccaacccc
ttacattcctaccgcctcagcgcgcccccggcccttccccagaagaagcggcgcagcacc
cagacatcgcccttccctgacgcggggtccagggtgctgtatgaacgctacccctcccaa
tatgacaacttgtcagaagaggagctgcaccctacgccgccattcccccttttcacgccc
atctcccccatgccccagacgaatgggggcctttttgtcgcccagtacatcgccagcgag
catacgggtgtcccctccagcccacctccactgccagaaaagaaaagcagacacatcctc
cagtacatgcagtttgtggaggactactccgagccgcagccctccgtgttctaccagatg
ccccagagtgagagcatctacgagcagcgcaacaagcgcttccaggaggtctacggcttc
aacgactccttcagcagcaccgactcggtccacgagccgctgctgcctccggcattgccc
ccgaaacaaaggcaactggcctcccactcttcctccccctcttcctcctcctcctcttct
ctctcctgccacctccagccgtctgtagcggccatggaggaggcgggctctgggctgggc
ctcagcatgtctgtttctaactcctacctgagtggccaagcttctttaaacacacccacg
agctcggaccaggttgccttgacccacgccaccgttctggatggcggcgggggcgggccc
aacgcttccctcgccggctcaatgggctctgtggccgtctgtcttccttctgagtcgtgt
ctcactggcgctctccactcagcgagcgagtgcacaaatgacgagggcggggagggcgag
tacgtcaacttgtactcctccagccaggccaacggaaagctgccgctctccctccgagaa
acgatcacggctgacgatgtgcttcaagaccccgcccctcagatgccatccaccaacagc
aaagaggccttggacaaggagaggaggcagaagtcaacggagtcggccgagagcgacgag
gaagacgtggacgagctctaccttatggaccacaaggagatcatgagcaggataacatta
aaacaagaaagcgatgacggcccggacgtccgcgcaggatcgggagatattctattagtc
cacgctacggaaacggaccgcagagatctcgttttgtactgtgaagcctttctgacgact
tatcggacttttataaaccccgaggagctcattaagaagctacactacagatacagcagg
ttctgccacagcccggacaccttcaagaagcgggtcagcaagaacaccttctttgtgctg
gtccgtgtggtggatgagctgtgcctggtggagctgacggaggacatcctgaagcagctg
atggacctggtgttcacgctggtgtgcaacggcgagctcagcctcgcccgcgtgctccgc
aagaacatcctggacaaggtggagcagcggaagctgctgcgctacaccaactcactcaag
ccgctcgctgcccgaggggtctccgcgaggccgggaactctccacgacttccgcagtcac
gagattgccgatcagctcactcttctcgacgcggagctcttctataaaatcgagattcca
gaggtgctgctctgggccaaggagcagaacgaggagaagagtcccaacctgacgcagttc
acggagcactttaacaacatgagctattgggtccgctctttgattatccagcaggagaaa
gctcaggaccgagagaagctgcttctcaagttcataaagataatgaagcacttaagaaag
ttgaataatttcaactcctacctggcgatactgtccgctctggactccgcccccatccgg
agattggagtggcagaagcagacctcggagggactggaggaatattgcacattgattgac
agctcctcctccttcagagcgtaccgagctgccttggctgaggtggagcctccgtgcatc
ccgtacctcggtctcattctgcaggacctgaccttcgtccacctggggaaccccgacctc
atctacgggaaggtcaacttctccaaacgctggcagcagttcaacattctggacagcatg
cggcgcttccagcaagtgcactacgagttcaagcgcaacgacgacatcgtctgcttcttc
aacgaattcagcgaccacctggcggaggaggccctgtgggagctgtcgctaaagatcaag
cccaggaacatcaccaggcgcaagacagagcgcgaggagaagacctag

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