Pseudoliparis swirei (Mariana hadal snailfish): 130204888
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Entry
130204888 CDS
T09868
Symbol
git2b
Name
(RefSeq) ARF GTPase-activating protein GIT2b isoform X1
KO
K12487
G protein-coupled receptor kinase interactor 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130204888 (git2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130204888 (git2b)
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130204888 (git2b)
Endosome - Golgi transport
Arf GTPase associated proteins
130204888 (git2b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
GIT1_C
GIT_CC
GIT_SHD
ArfGap
Ank_2
Ank
Ank_4
Ank_5
Ank_3
TTRAP
Motif
Other DBs
NCBI-GeneID:
130204888
NCBI-ProteinID:
XP_056287840
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Position
15:13056496..13073134
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AA seq
739 aa
AA seq
DB search
MSKRVRSREVCADCSAAEPRWASVNRGVLVCDECCSIHRGLGRHSSQVRHLTHSPWPPSQ
LQMVQTLYGNGANSIWEHSLLDPSSSSLSGKRKANPQDRVHPNKTEFIKAKYQMLVYVHR
MPCREDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHIAAKAGQ
VLQAELLAVYGADPGALDSSGKTPIDYARQAGHQDLADRLVEIQYELTDRLTFYLCGRRP
DHRNGQHFIIPQMADSSLDLSEFAKAAKKKLQSLSNHQFEELAMDVYDEVDRRETDAVWL
ATQNHSTLVTDTTVVPFLPVNPDYSSTRNQGRQKLARFSAHEFATLVIDILTDAKRRQWG
NSCDSPKESVELILQGIDSRHNSDSQDNDQPDYDSVASDEEPVQEATCGDGCNDGRTKSS
ESSDLSDGPITVQEFMEVKSALTASEAKIQQLLKVNCHLSEELRSMQGQLNSLQTENTTL
RWQPPSGQQPLQGPFGRHPPRGGRAMSMYETGSSPRQHPHRVEAARHDDGVVLQPFPTNM
GRGPLGTAASSLPTFPSSLSWSWDERSRRGCSLEGRSMMLESDYDTSPSHSELEEAGSPL
PASEAVQLGEEGEEDAALPCTEDVICKTEQITKNIQELLRAAQETKHESFLPCSQKICVA
VMEMAALFPKRPSSETVRGSLCLLTSSAGRLHGECQKAAEHNPSASDTQLVTQQVIQCAY
DIAKAAKQLVTVTTKENNN
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagcgagtccggagcagagaggtctgcgcggactgcagcgctgcggagccccgc
tgggcctctgttaacaggggggtgttggtctgcgatgagtgctgcagcatccaccgaggt
ctggggcgacacagctctcaggtccgacatctgacgcattctccgtggcccccctcccag
ttacagatggttcagacactttatggcaatggtgctaattccatatgggagcacagcctt
ctggacccgtcttcttcttcattgagtgggaaacgcaaagccaacccccaggacagagtt
catcccaacaagacagagttcatcaaagccaaatatcagatgttggtgtatgtccatcgg
atgccgtgtcgggaggatgacagtgttaccgcaaaggacctcagcaagcaactccactcc
agtgttcggaccggaaacctggagacctgcctcagactcttatctttgggagcacaggcc
aacttcttccatccagagaaaggaaacactcctctgcacatagcagcaaaagcaggacaa
gtgttgcaagcagaacttttggcagtttatggagcggatcccggggctctggactccagt
ggaaagaccccgatcgattacgcgagacaagctgggcatcaggatctggcagacaggctg
gtggagatccagtatgagctcaccgaccgcttaaccttttacctttgtggacgaagacca
gatcacagaaatggacaacacttcatcattcctcagatggcagacagcagcctggatttg
tcagagtttgctaaagctgccaagaagaagctccagtcgctgagtaaccatcagtttgaa
gaacttgccatggatgtttacgatgaagtcgacagaagagaaaccgatgcagtgtggctg
gccactcagaaccacagcactctggtaaccgacaccacagttgtgccttttctgcccgtc
aatccagattactcctccaccagaaaccagggtcgtcagaaattggcaagatttagtgcc
catgagtttgccaccctggttatcgacattctcactgatgctaaacgacggcagtggggt
aattcatgcgacagtcccaaagagagcgtggagctgatccttcagggaatagacagtcgc
cacaacagtgatagccaggacaatgaccagcccgattacgacagcgtggcctcagatgaa
gaaccggtgcaagaggccacttgtggagacggctgcaatgacggaaggaccaagagctcg
gagtcatctgacctctctgatggaccaatcacagtgcaggaattcatggaggtgaagagt
gccctgactgcatcagaagccaaaatacaacaacttcttaaagtcaactgtcacctcagt
gaagagctgcgtagcatgcagggccagctgaactccctgcagactgaaaacacaacgctg
cgatggcaaccccccagcggacaacaacccctccaggggccctttggtcgacacccgccc
cgcggaggtcgagccatgtccatgtacgagacgggctcttccccgaggcagcacccccac
cgggtcgaagcggctcgccatgatgatggagtcgtactgcaacccttcccgaccaatatg
gggaggggtcctttggggacggccgcttcctccctccctacattcccctcttccctgtcc
tggtcgtgggacgagcgatctcgaaggggctgcagtctggaaggacggagcatgatgctg
gagagcgattacgacacctcgccaagccactctgaactggaggaggcaggcagccctctt
ccagcctctgaagcagtgcagctgggggaggagggggaggaagatgccgccctgccatgc
acagaggacgtcatctgtaagacggagcagatcactaagaacatacaggagctcctgaga
gccgcccaggagaccaagcacgaaagcttcctgccttgttcacaaaagatctgcgtggct
gtgatggagatggccgccctgtttccgaagaggccgtcctcggagacggtgcgggggtct
ctgtgtctgctcacttcgagtgccggccggctccacggagagtgccagaaggcggcggag
cacaaccccagtgcgtcggacacccagctggtcactcagcaggtcatccagtgcgcctac
gacattgccaaagctgccaagcaacttgtcactgtgacaaccaaagaaaacaacaactaa
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