Pseudoliparis swirei (Mariana hadal snailfish): 130204933
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Entry
130204933 CDS
T09868
Symbol
ppp2r2ab
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03015
mRNA surveillance pathway
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130204933 (ppp2r2ab)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130204933 (ppp2r2ab)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
130204933 (ppp2r2ab)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130204933 (ppp2r2ab)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130204933 (ppp2r2ab)
03036 Chromosome and associated proteins [BR:
pswi03036
]
130204933 (ppp2r2ab)
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
130204933 (ppp2r2ab)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
130204933 (ppp2r2ab)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
130204933 (ppp2r2ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
130204933
NCBI-ProteinID:
XP_056287920
LinkDB
All DBs
Position
15:4342628..4357229
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AA seq
529 aa
AA seq
DB search
MDSDFSCSRCGCPDNRDPLQQSLHSARWLMMDRGSVNNITMSVKAYAVKNTDFCLCLCLP
SFYFKWVGQNDTHATNRCLQNAALLSVLSAKLRLVAAPQEMQLIFLGAKPDIISTVEFNH
TGELLATGDKGGRVVIFQQEIENKNQPQFRSEYNVYSTFQSHEPEFDYLKSLEIEEKINK
IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYKDPNTITGLRVPVLI
PMDLMVEASPRRVFANAHTYHINSISVNSDDETYLSADDLRINLWNLEITDRSFNIVDIK
PANMEELTEVITAAEFHPLQCNTFVYSSSKGTIRLCDMRASALCDKHSKLFEEPEDPSNR
SFFSEIISSISDVKFSHNGRYMMTRDYLSVKIWDLNMESRPVETYQVHEYLRSKLCSLYE
NDCIFDKFECCWNGDDSVVMTGSYNNFFRMFDRGQRRDMTLEASRENSKPMQVLKPRKVC
AGGKRKKDEISVDSLDFNKKILHTAWHPQDNIIAVATTNNLYIFQDKVN
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggactctgatttcagttgctcacggtgcggttgtcccgacaatagggaccctctgcag
cagagccttcattcggccagatggctgatgatggacagaggttcagtgaataatatcacc
atgagtgtgaaggcttatgcagttaaaaacactgacttttgcctttgcctttgcctcccc
tccttttattttaaatgggttggacaaaatgatacacatgccacaaaccgttgcctccaa
aatgcagcgttattgtcggtcctttctgcgaaactacggctggtggccgcgccccaagag
atgcaacttattttcctcggggcaaaaccggacatcatatccacggtcgagtttaaccac
acaggggagctgctcgccacgggagacaaggggggccgtgtcgtcattttccagcaggaa
atagagaataagaatcagcctcagttccggagcgaatacaatgtttacagcactttccag
agccacgagccggagtttgactacctgaagagtttggaaatagaagagaagatcaacaag
atccgctggcttcctcagaagaacgcggctcagttcctgttgtcgactaacgataagaca
atcaagttgtggaaaatcagcgaacgagacaagagaccagagggttataatctcaaagag
gaggacggacgctacaaagaccccaacacgatcacgggactgcgggtgccagttttaata
cccatggacctcatggtggaagccagtccgcggagggtgttcgccaacgctcacacctac
cacatcaactccatctcggtcaacagcgacgacgagacgtacctgtccgcagacgacctc
cgcatcaacctctggaacctcgagatcaccgaccgcagcttcaacatcgtcgacatcaaa
ccagccaacatggaggagctgacggaggtgatcacggcagcggagttccatccgctccag
tgcaacaccttcgtctacagcagcagcaaaggaaccatccgcctgtgtgacatgagggcg
tcggcgctgtgcgacaagcactcaaagctgtttgaggagccggaggatcccagcaatcgc
tccttcttctccgagatcatatcctcgatctcggatgtgaagttcagccacaacggacgc
tacatgatgaccagggactacttgtccgtcaagatctgggatctgaacatggagagcagg
ccggtggagacctatcaggtccacgaatacctgaggagcaagctgtgctcgctgtacgag
aacgactgcatctttgacaagtttgaatgctgctggaatggcgatgacagtgtggtgatg
accggctcgtacaacaacttcttccggatgttcgaccgcggccagcggcgggatatgacc
ctggaggcctcccgagagaacagcaagcccatgcaggtcctgaagcctcgcaaggtgtgc
gcgggcggaaagcgcaagaaggacgaaatcagcgtggacagtttggacttcaacaagaag
atcctccacacggcctggcatccccaggacaacatcatcgccgtggcgacgaccaacaac
ctctacatattccaggataaagtgaactaa
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