Pseudoliparis swirei (Mariana hadal snailfish): 130204946
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Entry
130204946 CDS
T09868
Symbol
igsf9a
Name
(RefSeq) protein turtle homolog A
KO
K22655
immunoglobulin superfamily member 9
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pswi04515
]
130204946 (igsf9a)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
Other
130204946 (igsf9a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_VEGFR-1-like_5th
Ig_5
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
130204946
NCBI-ProteinID:
XP_056287947
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All DBs
Position
15:4448374..4501505
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AA seq
1159 aa
AA seq
DB search
MGSARSHLQTFTGVALLCLFWAAGGARPEVRGKVGGAAELDCIFPPSEPTTDEPSASLHV
VEWIRRGLDIPVLIRFGAYAPRLHPQYEGRASLVRVTDLRLEDLRLQDGGAYECRILLLD
EASDELQNATWTQLSVTAPPTFTETPPPALEALVGSHLSLACVAIGNPTPTITWLKDDSV
IPRIHYQEGALSLREVSVRSAGRYACHASNAEGNATRTTDVKVKGPPVIVIPPTSTALNK
SQNALLRCQAVADPPNMTYVWQRGGENVHHIESLKSRVKIMVDGTLLITSLIPEDSGNYT
CLPSNGLLNPPSASANLTVMHAALALPMPRRTYLPAGMEGVVTCPSAAQPPLLRVDWTKD
GESLDLSLYPGWTLTPGGSLLMTTVNDDTAGVYTCTPYNSYGSAGPSGPTDVILQDPPSF
SVAPEKQYRREAGGTLLVPCRGNKDPTMKVTWSKVDSARRTSYSVEPNGSLLLQPLAKDH
QGAWECSVANRVASVKAVTRVFVLGTSPHAATSLSVSPGVRQANVSWEAGFDGGSAQTFS
VWAKKTSDGDDDGRRDWFSVTVPSSSGCGLQVTGLSPATDYQFSVLSHNKMGTGPFSEIA
AARTSDPPPRSSRPEPPAALSAQRGSAGVVLRWSLPEARRPPVTGFVLQSRTEPGEWVLH
LDEDIGADSSEMLVPGLRKDCVYELRLLSRRGEVLSEPSPSVNVSTMGMEIYPATSRLLD
LVPEPLLAGVLGGVGFVCLALALLLGAACVISRRRDRRRRKKLHEPPSVIYKCSSSIKAS
GAGSPDSVLKTSLLPASILYPTTCSTTTTSSSSQTDCSSFGVESRHHHYRRKQLPSSVYG
SGRLTRTTSSPIPSPIEMISRGPDGRFALLPFGRDAQSVDIEESGGRHGRAGVRRSASVH
SERENGKHPAFVLSVDLLPSEPAETDSAGQNLGMVRGPYISDQKADRGGFLDFSSLGSNS
SLATISHHDRGITPTFPVLPHIRSGLGQPSTNASALVLQMEHERERGNLSHCLKLAQERE
ELERELHSYTLERGSARDMKREHSGEVGGNKLVWEYRSSTLPHRYPQGNKESFGLSQSSF
SSSSVHWGVRPPLTLIPASSSSFESGDFLRPLHPSPNKPPSYLGRRAALLSHIPPQSIRD
MKGSRQHQRAMIIRHNPQS
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggggtccgcgagatcacatttgcagactttcacaggggtggcacttctttgcctattt
tgggccgccggaggcgcgaggccggaggtgcgtggaaaggtcggcggcgcggcggagctg
gactgtattttccctccatcggagccgacgaccgacgagccctcggcctccctgcacgtg
gtcgaatggatccgacggggcctcgatatccccgtcctgatcaggttcggggcctacgcg
cctcgactccacccacaatatgagggccgggcgtctctggtgcgagtcaccgacctgagg
ctggaggacctgcggctgcaggacgggggcgcgtacgagtgtcggatcctcttattggac
gaagcctcggatgagctgcagaatgccacctggactcagctgtctgtcaccgccccgccc
accttcaccgaaaccccgcctcctgcgctggaggctctggtcggaagtcacctctctctt
gcctgcgttgctatcggcaacccgaccccaaccatcacttggctaaaagatgacagtgtg
attccaagaatacattatcaggaaggagccttatctctgagagaggtgagcgtgaggtca
gcgggacgctacgcctgtcacgcctccaacgccgaggggaacgccacgcgcacgaccgac
gtcaaggtcaaaggtccacctgtcatcgtcatccctcccacaagcaccgcactcaacaag
tcccagaatgcacttctgcggtgccaggcggtggccgacccccccaacatgacgtacgtg
tggcagagaggaggagagaacgtccaccacatcgagtctctgaagtcgcgagtgaagatc
atggtagacggaactctactcatcaccagtctcatccccgaggattctgggaactacact
tgcttgccgagcaacggcctgctgaacccgcccagcgcctcggccaacctcaccgtcatg
cacgcggccctggctctcccgatgccccggcggacgtacctccccgccggcatggagggc
gtggtcacgtgcccgtcggccgcgcagccgccgctgctgcgcgtggattggacgaaagac
ggggaatcactcgacctgtctttgtacccaggatggaccttgacacccgggggctctctg
ctcatgaccacggtcaacgacgacacagccggcgtgtacacgtgcacgccgtacaacagc
tacggcagcgcgggtccgtccggccctacggacgtcatcctgcaggaccccccgtcattc
agcgtcgctccagagaagcagtacagacgggaagctggcgggaccctgctcgtcccctgt
cgagggaacaaggaccccacaatgaaagttacctggagcaaggtcgactcggcccgacgc
acctcttactccgtagaacccaacggttctcttctcctgcagccgctcgcgaaggaccac
cagggggcgtgggagtgcagcgtcgcgaaccgcgtggcctcggtgaaagccgtcacgcga
gtcttcgtcctgggaaccagtccccacgccgccacctctctgtccgtctccccgggggtg
aggcaggccaacgtgtcctgggaggcgggctttgatggaggatcggcgcagacattttca
gtttgggcgaagaagacttcggatggagatgacgacgggaggcgggactggttctccgtg
accgtgccctcctcctccggctgcggcctgcaggtgacgggcctgtctcccgccactgac
taccagttcagcgtcctgtctcacaataagatgggcaccgggcccttcagcgagatcgcc
gccgcgcgcacctcggatcctccgccgaggagcagccggccggagccccccgcggcgctg
tcggctcagcggggctcagcgggcgtcgtcctgcggtggtccctccccgaggcccggcgc
ccccccgtcacgggcttcgtcctccagtcccgcaccgagccgggggagtgggtcctccac
ctggacgaggacatcggcgccgacagcagcgagatgctggtcccgggtctgcgcaaggac
tgcgtgtacgagctgcggctgctatctcgtcgcggggaggtgctgagcgagcccagtcca
tcagtcaatgtctccaccatggggatggagatctaccccgccacctctcgactcctggac
ctggtcccggagccgctgctggcaggcgtgctgggcggggtcggcttcgtgtgcctggct
ctggccttgctgctgggggccgcctgtgtcatcagccgcaggagggaccggcgtcgcagg
aagaagctgcacgagcccccctctgtcatctataaatgttcctcatcaataaaggcttcc
ggcgctggcagtccagacagtgtgttgaagacgagcctacttccagccagcatcctctac
cccaccacttgctctaccaccaccacctcctcgtcgtcgcagacggactgttcctccttc
ggcgtcgagagtcgtcaccatcactatcggcgaaagcaactcccgtcgtccgtctacggc
tcaggccgcctcacgaggacgacgtcttctccgattccttccccgatcgagatgatctcc
agaggcccggatgggcgcttcgcgctcctcccgttcggccgcgacgcgcagagtgttgac
atcgaggagagcggaggaaggcacggtcgagctggagtccgaaggtccgcgtcggtgcac
tcggagagggaaaacgggaagcatccggcgttcgtgctctcggtggatctcctaccttcc
gaaccagcagagaccgattccgcagggcaaaatctcggcatggtccgaggcccatacatc
tcggaccagaaggcggaccgcggcggctttctggacttcagcagcctgggctcaaacagt
agtttggccaccatttctcatcacgaccgaggaataactcccacgttccccgtgctcccg
cacatccggtcgggcctcggtcagccatccaccaacgccagcgccctggttctccagatg
gagcacgagcgcgagagaggaaacctgagtcactgcctgaagctggctcaggagcgggag
gagctggagagggagctccacagctacactctggagaggggctccgcgagagacatgaag
agggagcactccggcgaggtcggcggtaacaagcttgtgtgggaatatagaagcagcacg
ttaccacacagatacccccagggcaacaaggagagctttggtctgtcacagagttctttc
tcttcctcttctgttcattggggcgtccgcccacctctcactctgatcccggccagttcc
tctagtttcgagtccggcgacttccttcgtccgctccatccttccccgaacaaacccccc
tcctatctcgggaggcgggcagctttactctcccacatccctcctcaaagcatcagagac
atgaaagggtcgaggcagcaccagagggctatgataattcgccacaatccacagtcttag
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