Pseudoliparis swirei (Mariana hadal snailfish): 130204979
Help
Entry
130204979 CDS
T09868
Symbol
zswim6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130204979 (zswim6)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130204979 (zswim6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
SWIM
Motif
Other DBs
NCBI-GeneID:
130204979
NCBI-ProteinID:
XP_056288019
LinkDB
All DBs
Position
15:19954310..19997113
Genome browser
AA seq
1138 aa
AA seq
DB search
MAERVQQLPAKRLCCRPGYGAACRQGQRAAGAPCGGGVSGAAPGESSKTQNPETLLDIAA
RRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNIGSIGGEESGSGGG
ESADETRLPFRRGIALLESGCVDNVLQVGFHLSGTVREPATASEPELVCNVSVSFDRCKI
TAVTCSCGNKDIFYCAHVVALSLYRVRKPEQVKLRLPISETLFQMNRDQLQKFVQYLITV
HHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASVDDDNCWHLDEEQVQEQVKLFLS
QGGYHGSGKQLNLLFNKVREMLKMRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKY
RQLWDELGALWMCIVLNPHYKPEQKGFWLRQLRRWNGVDVCPLEDGNHGSELTNLTNALP
QGLHGNPDSLTRPHRTVFTRAIEACDLHWQDPHLQHIITEDHYANYCYHDNLSSSLFDAR
GWPLWHEHVPTACARVDALRSHGYPKEALRLAIGIVNTLRRQQQKQMEFFRTHKKELLHK
GTTSVTNLEGWVGHPLDPIGTLFSTLMETGRGGEDGAAALLDFSGSPGSGRRTQHPVLPV
ERFLEEGESFVSLAVETALIGLGQQRVMPDGLYAQEKVCRNEEQLLAKLQEVNVGDALVK
IFRKQAAFLLEAGPYSGLGELLYRESVPMHTFAKYLFTSLLPHDAELAYKIALRAMRLPV
LESTSSSGDLSRPHHIVSVVPNRLPRWFTLSHIETQQCELASTMLTAAKGDARKLETVLE
SIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNWRRREM
VRWLVTCATEAGVFALDSIMQSWFTLFTPTEATSVVASTVMSNSTIVRLRLDCHQQENLA
NSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAAATGMNYTQLFTIARYM
EHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELASVIPLVVKS
VKCATVLSDILRRCTLTTPGMVALHSRRNSGKLMPLDKAPLRQLLDATIGAYINTTHSRL
THISPRHYSEFIEFLGKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgtgcagcagctcccggcgaagcggctctgctgtcgcccgggatatggt
gctgcgtgtcggcaaggccagcgggccgcgggggctccgtgcggcggcggcgtctccggc
gccgcgccgggcgagtccagcaagacgcagaacccggagaccctcctggacatcgcggcg
cgcagagtcgcggagaagtggccgtttcagcgggtggaggagcgcttcgagcgcatcccg
gagcccgttcagaggcggatcgtgtactggtcgttcccgaggagcgagcgggagatctgc
atgtactcgtcgttcaacatcggcagcatcggcggggaggagagcggaagcggcggcggg
gagagcgccgacgaaacgcggctgcccttccgacggggcatcgctctgctggagagcggc
tgcgtggacaacgtcctgcaagtcgggttccacctcagcggcacggtgagggagccggcc
acggcctcggagcccgagctggtctgcaacgtcagcgtcagcttcgaccgctgcaaaatc
acggcggtgacgtgcagctgcggcaacaaggacatcttctactgcgcccacgtggtggcg
ctctcgctgtaccgcgtacggaagcccgagcaggtcaagttgcggctgcccatctcggag
acgcttttccaaatgaaccgggatcagctgcagaagttcgtccagtacctgatcacggtg
caccacaccgaggtgctgcccacggcgcagaagctggccgacgagatcctttcgcagaac
tctgagatcaaccaagttcacggagctccagatccgacggccggcgccagcgtggacgat
gacaactgctggcatctggacgaggagcaggttcaggaacaggtcaagctcttcctctcc
cagggcgggtaccacggctcggggaagcagctcaacttactgttcaacaaggtgagggag
atgctgaagatgagggactccaacggcgctcgcatgttgacgctgatcacagagcagttc
atggccgacccccgactggcgctgtggaggcaacagggaaccaccatgactgacaagtac
aggcagctgtgggatgaactaggagccctgtggatgtgcatcgtgctgaacccccactat
aaacccgagcagaagggtttctggctccgacagcttcgcaggtggaacggcgtggacgtc
tgccccttggaggacggtaaccatggcagcgagctgaccaatctgactaacgctctgccc
cagggcctccacggaaacccggattccctcactcggcctcaccggacggtgttcacgcgg
gcgatcgaggcctgcgacctgcactggcaggacccccacctgcagcacatcatcaccgag
gaccactacgccaactactgttaccacgacaacctcagcagctccctcttcgacgcccga
gggtggcccctgtggcacgagcacgtcccgacggcgtgcgcccgagtggacgcgctgagg
tcacacggctacccgaaggaggcgctgcggctcgccatcggcatcgtcaacacgctgcgg
aggcaacagcagaagcagatggagttcttccgcacgcacaaaaaagagctgctccataaa
ggcaccacgtcagtgaccaacctggagggctgggtgggccaccctctggaccccatcggc
accctgttcagcaccctgatggagacggggcggggcggagaggacggcgccgcagcgctg
ctcgacttctcaggctcgccgggttcgggtcggaggacacagcatcctgttttgccggtg
gagcgtttcctggaggaaggcgagtcgttcgtgtcgctggccgtggagacggctctgatt
ggcttagggcagcagagggtgatgccggacggcctctacgctcaggagaaagtgtgtcgc
aacgaagagcagctattggccaagcttcaggaggtcaacgtgggcgacgcgctggtgaag
atcttcaggaaacaagccgctttcctgctcgaggctggtccttacagtggtctgggggag
ctgctctacagggagagcgtccccatgcacacgtttgccaagtatctcttcacctccctg
ctacctcatgacgccgagctggcgtacaaaattgcactgagggccatgcgattgccggtc
ctggagtccacgtcctcctccggcgacttgtctcggcctcaccacatcgtgtccgtggtg
cccaaccgcctcccccgctggttcacgctcagccacatagagacccaacagtgtgaactg
gcctccactatgctcactgctgctaaaggcgacgcccgtaaactggaaaccgtgttagag
tccatccagaagaacatccactcctcttcacacatcttcaaactggcccaggacgccttc
aagatcgccactctcatggacagcctgcccgacattacgctgctcaaagtctccctggag
ctgggtcttcaggtgatgaggatgacgctgtcgaccttgaactggcggaggagagagatg
gtgcgatggctcgtcacctgcgctactgaagccggtgtgttcgcgctggacagcatcatg
cagagctggttcaccctcttcaccccgaccgaagccaccagcgtcgtggcgagcaccgtg
atgtccaacagcaccatcgtccgcctgcgtctggactgccaccagcaggagaacctggcc
aactcggcccgcaccctggccctgcagtgcgccatgaaggacccccagaactgcgccctc
tcggccctcacgctctgcgagaaggaccacattgccttcgaaacggcctatcagattgtc
ctggacgccgccgccacgggcatgaactacacccagctgtttacaatcgcgcgctacatg
gagcaccgcggttaccccatgagggcgtacaaactggccacgttggccatgacgcacctg
aacctcagctacaaccaagacacgcacccggccatcaacgacgtgctgtgggcgtgcgcg
ctcagccactcgctgggcaaaaacgaactggcgtcggtcatccccctggtggtgaagagc
gtgaagtgcgccaccgtcttgtcggacatattgcggcggtgcacgctgacgacgccgggc
atggtggcgctgcacagccgcaggaactccgggaagctgatgcctctggacaaggctccg
ctcaggcagctgctggacgccacgatcggggcctacatcaacacgacgcactcgcggctg
acgcacatcagcccgcgccactacagcgagttcatcgagttcctcggtaaagccagggag
acgttcctgatggcgcacgacggacacatccagttcacgcagttcatagacaacctaaaa
cagatatacaagggcaagaagaaactcatgatgctcgtcagagaacgatttggttga
DBGET
integrated database retrieval system
