Pseudoliparis swirei (Mariana hadal snailfish): 130204989
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Entry
130204989 CDS
T09868
Name
(RefSeq) lipoxygenase homology domain-containing protein 1-like isoform X1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130204989
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130204989
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130204989
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Other domain-containing proteins
Others
130204989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
DUF3987
Motif
Other DBs
NCBI-GeneID:
130204989
NCBI-ProteinID:
XP_056288042
LinkDB
All DBs
Position
15:17233988..17269406
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AA seq
1313 aa
AA seq
DB search
MAMVQVEVKKPDTKKDKKKDKKKKKKEEEEEVEIVEELQEVVETFSFPCGRWLARDEEDG
ELVVELLTEGNEDLEVSSYEVHVFTGTMWGAATDADVYVNIYGEIGDTGERRLRKANNLN
KYEKGHEDIFNITAVDLGTLKKLRIRHDNSQASAGWFLDRVEIVDNKDDTTYFFPCKRWL
AVDEDDGQLARELVPVDEAFMKKGDDSDDEDSETTLGLEQKAMSTTYTMRIKTGDKKYGG
TDANIFMILYGTKDDTGIINLKASKTHKNKFERAMVDEFIVEAVDIGPLKKLRVGHDNCG
GGSAGWFLDWVEIDAPSLGLKLHFPCGRWLDKGEDDGAIVRDLFPNSLQTELYTPFSTSD
VFAAGTDADVFIVLYGRDAVCTQQKSLCVNKRERRMYFEREAEDMFIVELEDVGDVIEKI
RIGHDNRGINPGWHLDSVEIRRLLRKGKGSETVIFPCECWLAKSEDDGETVRELVPSDII
TEKLSRDGSLKFTEVEVDDALETHTYDVSVMTGDEYGGGTDANVFLTIYGDQGDTGERKL
RKSETNGNKFERGSVDKFTIEAVDLGQVFRIKIRHDNSMMSADWYLDQVEVVDVDTEEAY
LFLCERWLSRKREDRRIDRVFYVKGYEGVRESLNSKKKSSVVTVKSVDSNMNKKSKKKKE
EEVELPIIPYHFTICTGPERDASTTSRAYVIIIGANHTQTERLWLDLPDERQGFEADSLE
SFQSHGSDVGEIKKVELGHDGATPESCWLVDELSVAVPTKGVKYVFACKCWLAKDRGDGL
TSRVFNVLDAEAICISQQVIYEVTVVTGDVQNAGTDTQIFMSVFGSNGSTEEMLLQKNED
RFERGQEDTFNMEIDDIAPLRKMRLRIDGSGSRPDWFLDQVIMRNLTTEEVSSFTYEEWL
SRTRGPKRTMLCEMAAVVDEELMVELTTYTVQVKTSDSAGAGTDANVWIIVFGENGDTGT
QALKECSKSNKFERKQLDTFRFSEILSMGELSKIRVWHDNSGPAPGWHLEYIDVKDEILD
KTFRFPCDRWLAKNDDDGQIMRELACANNDFLDLNEKTKYDICITTGDTETKENAWIVLE
GRKGRSKEFVMENSSKKKRFLRGNADRFDFSSKNLGDIAGICLGHTPKDGKKVKGEVFWK
VEEVVVTERELGNKYIFTCNALIPLSPKRDDFLTVECSKAIESFASKARSLVPVKYEIIV
VTGDEKGAGTDANGFITIYGTNGDSGQRPLRQKFRNLFEREQTDRFLLEMLDMGELQKVR
VEHDNAGTNPSWLLDRVEVTNTANGVTTIFLCGKWLDTKRADGLIARVLYPKY
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtgcaggttgaggtgaagaagccggacaccaagaaagacaagaagaaggat
aagaagaagaaaaagaaagaggaagaggaggaggtggagatagtggaggagctgcaggaa
gtagtggagaccttttctttcccgtgcggccgctggctggccagggatgaggaggatggg
gagctggtggtggagctgctgactgagggcaatgaagacctggaggtgagctcatatgag
gttcatgtgttcactgggactatgtggggggcggcgaccgatgccgacgtctacgtcaac
atctacggagagatcggcgacacgggcgagcggcggctcaggaaggccaacaacttgaat
aaatatgagaaaggccatgaggacattttcaacatcacagcggtggacttggggaccttg
aagaagctgaggatccgacatgacaactctcaggccagcgccggctggtttttggaccga
gttgaaatcgtagacaacaaagatgacaccacgtactttttcccttgtaaacgctggctg
gctgttgatgaggacgatggtcagcttgccagggagctagtccctgtggacgaggccttc
atgaagaaaggagatgatagtgatgatgaagactctgaaaccacacttggtctggaacag
aaagccatgtcaacaacgtacacaatgaggataaaaactggtgacaaaaagtatggagga
actgacgctaatatctttatgattctgtacggcaccaaagatgacacagggataattaac
ctgaaggcttcaaaaactcataagaataaatttgagcgcgctatggtcgatgagttcatc
gtggaggccgtggacattggacccctgaagaagctgcgtgtcggacacgacaactgtggt
ggaggatcagcaggctggttccttgactgggtggagatcgatgccccgtctcttggcctg
aaactgcacttcccctgcggccgctggttggataaaggcgaggatgacggggccatcgtc
agggaccttttccctaattctcttcagacggagctttacaccccattctccacgagcgac
gtgtttgcagccggcacggacgccgacgtcttcatcgtcctctacgggcgcgatgcggtg
tgcacccagcaaaagagtctgtgtgtcaacaagagggagaggaggatgtactttgagaga
gaagctgaagacatgtttattgttgagctagaagatgtgggcgatgtcattgaaaagatc
cggatcggccacgacaaccgcgggatcaacccgggctggcatctggacagcgtggagatc
agacgtctgctcaggaagggaaagggctcggagaccgtcatcttcccatgcgaatgctgg
ctcgccaagtctgaggacgatggagagacggtgagggagctggtgccctccgacatcatc
accgagaaactttcacgagacgggagcctgaaattcaccgaagtggaggtggacgacgcc
ctggagactcacacgtacgacgtgtcagtgatgacgggcgatgagtacggaggaggcacc
gatgccaacgtcttcctcaccatttacggggaccagggggacaccggggagaggaagctc
cgaaagtcagagacaaacggcaacaagtttgaacgaggatctgtggataagttcaccata
gaagccgttgacctcgggcaggttttcaggatcaagatccgccacgataacagcatgatg
agcgccgactggtacctggaccaggtggaggtggtcgacgtggatacggaagaggcctat
ctcttcttgtgtgaacgttggctgtccaggaagagggaggaccggcgcattgacagagtc
ttctatgtgaagggctacgagggtgttagagaaagcctcaacagcaaaaagaagagctcg
gtcgtgacggtgaagagcgtcgacagtaacatgaacaaaaagagcaaaaagaagaaggag
gaggaagttgagctcccgatcataccataccacttcaccatctgcaccggaccggagcgt
gacgcgagcaccaccagccgggcttacgtcatcataatcggtgccaatcacacccagacg
gagaggctgtggctggacctgccggacgagaggcagggcttcgaggccgactctctggag
agctttcagtcccacggctcagatgtgggggagatcaaaaaagtcgagctcggtcatgac
ggggccactccggagagctgctggctggttgatgagctgtcagttgccgtgccaaccaaa
ggggtcaaatatgtcttcgcttgcaagtgctggctggccaaagatcgaggagatggtttg
acttctcgagtgtttaacgtgctggatgcagaggccatttgcatctcccagcaggttatt
tacgaggtgaccgtggtaacgggagacgtgcagaacgcagggacagacacccagatcttc
atgtctgtgttcggatccaatggcagcacagaggagatgctgctgcagaagaacgaggac
aggttcgagcgcggtcaggaggacactttcaacatggagatagacgacattgctccactg
aggaaaatgaggcttcgtatcgatggctccggcagtcgacccgactggtttctggatcag
gtgatcatgcgtaacctgaccacagaggaggtgtcctccttcacctacgaggagtggctc
tccaggacccgagggccgaagaggaccatgctctgcgagatggccgcggtggtggacgag
gagctgatggtggagctcaccacgtataccgtccaggtcaagaccagcgacagcgcaggg
gccggcaccgatgccaacgtgtggatcatagtcttcggagagaacggagacacggggacg
caggcgctgaaagagtgcagcaagtccaacaagtttgagcgcaagcagctggacacgttc
cgcttctcggagatcctcagcatgggagagctctccaaaatacgagtctggcacgacaac
tcaggtcccgctccaggatggcacttggaatacatcgacgtgaaggatgagatcctggac
aagacctttcgttttccctgtgaccgctggctcgccaagaatgacgacgatggacagata
atgagggaactggcgtgcgccaacaacgacttcttggacctcaacgagaagaccaagtac
gacatttgtatcacgactggagacacggaaaccaaagaaaatgcctggattgtccttgag
gggaggaagggccgatcaaaagaatttgtaatggagaactcctcgaagaagaaaaggttc
ttgcggggaaatgctgacaggtttgacttttcgtccaagaacctgggcgatatcgccggt
atctgcctgggccacacacccaaggacggaaagaaagtaaagggggaggttttctggaaa
gtggaggaggtcgttgtcactgaaagggaactgggaaacaagtacatcttcacttgcaac
gccctcatccccctctctccaaagagggacgatttcttaaccgtcgagtgctcaaaggcc
atcgagagcttcgccagtaaagcgcgaagcctcgtgcccgtcaagtacgaaatcatcgtc
gtcacgggagatgagaagggagccggtacggacgccaacggtttcatcaccatctacggc
accaatggagattcgggccaacggcctctcaggcagaagtttcgaaaccttttcgaacgc
gagcagacggaccggttcctgctggaaatgctggacatgggcgagctgcagaaggtccgg
gtggagcacgacaacgctggcacgaaccccagctggctgctggatcgcgtggaagtcacc
aacacagccaatggcgtcaccaccatcttcctgtgtgggaagtggctggacactaagagg
gccgacgggctgatagccagggtcctctacccgaaatactag
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