Pseudoliparis swirei (Mariana hadal snailfish): 130204991
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Entry
130204991 CDS
T09868
Symbol
ark2ca
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130204991 (ark2ca)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130204991 (ark2ca)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130204991 (ark2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_Vps41
zf-RING_16
RINGv
Prok-RING_4
zf-Nse
zf-RING_10
zf-RING-like
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130204991
NCBI-ProteinID:
XP_056288046
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All DBs
Position
15:complement(17268762..17282773)
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AA seq
349 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFTRHQHSHATSCRHFALGAPQAPISAEFPLGHAGQPP
PQTGLAAHLPPPAHQPPLTALPAPPQFQDVPGPPFLPQALHQQYLIQQQLLEAQHRRILP
HSRRTQERLPLNPHRMRSGYEFSHPLHVPQQMTQQQQRYLAEGTDWDLSVDAGLPHHQYQ
LQQLPQHYQHYLASPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQSLNPSRHATAVR
ESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYKKRKPLLLKIEEEEEETDVDEKCTIC
LSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLNPDS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacatgttggatatctggttctccccgtcttcggctcagttagaaataga
ggagctcacttcaccaggcaccagcacagccatgcgacctcctgccgacactttgccctg
ggcgctccccaggcgcccatctcggcggagttccccctgggacacgccggtcagccgccg
cctcagaccggcctcgccgcccacctgccgccgccggcacaccagccgccgctcactgcc
ctgcccgcaccccctcagttccaagatgtgccgggacctccattcctacctcaggcctta
caccagcaatacctcatccagcagcagcttctcgaagcgcagcaccgcaggatcctcccg
cactccagaagaacccaggagcgtcttcccctgaaccctcaccggatgcgctcgggctac
gagttctcccaccccctccacgttccccagcaaatgacgcagcagcagcagcggtacctg
gccgaaggcaccgactgggatctcagcgtggacgccggcctccctcaccaccagtaccag
ctccagcagcttccacagcactatcagcattacctggcctcccctcggatgcaccacttc
cccaggaacacgtcctctgcacaagtggttgtgcatgaaatcagaaactacccgtacccc
cagctgcacctgttggccctgcagagcctgaacccctcgcggcacgccaccgccgtgaga
gaaagctacgaggagctgttgcagctggaggaccggctggggagtgtcagcagaggagcg
gtccagacgaccatcgagcgattcaccttcccacacaaatacaagaagaggaagcccctg
ctgctgaagattgaggaggaggaggaggaaaccgacgtggacgagaaatgcaccatctgt
ctgtccatgctggaggacggagaggacgtcaggagattgccctgcatgcacctcttccac
cagggctgcgtggaccaatggctggccaccagcaggaagtgtcccatctgtcgagtggac
atcgaaacacagctgaaccccgacagctga
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