Pseudoliparis swirei (Mariana hadal snailfish): 130205006
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Entry
130205006 CDS
T09868
Symbol
arrdc1b
Name
(RefSeq) arrestin domain-containing protein 1b
KO
K26228
arrestin domain-containing protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205006 (arrdc1b)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
130205006 (arrdc1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arrestin_C
Arrestin_N
Vps26
Spo0M
LDB19
Rgp1
Motif
Other DBs
NCBI-GeneID:
130205006
NCBI-ProteinID:
XP_056288072
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Position
15:complement(3866901..3904604)
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AA seq
430 aa
AA seq
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MGKLQEFDITFANNKVVYGPGESISGSVNIRTGNGLHYKSIKVNCQGSCGISNKVNDATW
ALEEQYFNSTLSVADKGTLAAGEHSFPFQFLIPVAVPTSFEGPFGKIVYRVRADIDTPRF
SKDHKALRPFYLLNMLNLNEVPAIDHPSYAVTTKKFSYLLVKTGTLMLKARSDLRGYIPG
QVIKLAAEIHNKSGKDTGCVLASLIQKVTYKTKRPVFDLRTIAEVEGAGVKAGKHAEWRE
QIIVPPLPQSELAGCSLIDISYFIQVSLKSPDAVVTLPICIGNIAVNMSPSRPRLSAPTG
APGAAGVTPSAPPAEEGEEPEEGMCAGGVASEEIPTKSHSQQDPFGQPVSMSPGAALPPG
HGRPDASTPMFCVSTGATIPFFTEGNVTPVPTSCSLILPPEYSSCDYPHEPPPTYEESCS
NANSSFNSIQ
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagcttcaagaatttgacatcacttttgccaacaacaaggtggtttacggtccg
ggagagtccatcagcggcagcgtgaacatacggacgggcaacgggctgcactacaaatcc
atcaaggtgaactgccagggctcgtgtgggatctccaacaaagtgaacgacgccacatgg
gctctggaggagcagtacttcaacagcacgctgtccgtcgctgacaaaggaaccctggcg
gcgggcgagcacagtttccccttccagtttctcattccagtcgccgtgccgacctccttc
gagggacccttcgggaagatcgtttaccgcgtgagggcggacatcgacacgccgcgcttc
tccaaggaccacaaagccctccggcccttctacctgctcaacatgctcaacctcaacgag
gttcctgccatcgaccatccgagttacgccgtgaccacgaagaagttcagctacctgctg
gtgaagacggggaccctgatgctgaaggctcgcagtgacctgaggggttacatccccggg
caggtcatcaagttggccgcggagatccacaacaagtctggaaaggacacgggatgcgtg
ctggccagtctcatacagaaagtgacgtacaagaccaagcggcccgtgtttgacctgcgc
accatcgcggaggtggagggcgccggcgtgaaggcgggcaaacacgcagagtggagggag
cagatcatcgtccctcctcttcctcagtcagaactggccggctgcagcctcatagacatc
agctatttcatccaggtgtcactaaagtctccggacgccgtcgtcacgctgcccatctgc
atcgggaacatcgccgtgaacatgtctccgtcgaggcccaggctctccgctccaacgggc
gcacccggcgcggcgggcgtgacgcccagcgctccgccggcggaggagggggaggagcca
gaggagggcatgtgtgcgggcggcgtggccagcgaggagatccccaccaagagccactcc
cagcaggaccccttcgggcagccggtcagcatgtcgccgggcgccgcccttcctcccggg
cacggccggcccgacgcctccacgcccatgttctgcgtgtccacgggggccaccatacct
ttcttcaccgaggggaacgtgactcccgtccccacttcctgttctctcatcctccctccg
gagtacagcagctgcgactaccctcacgagcccccgcccacttacgaggaaagctgcagt
aacgccaactccagtttcaacagtatacagtga
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