Pseudoliparis swirei (Mariana hadal snailfish): 130205009
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Entry
130205009 CDS
T09868
Name
(RefSeq) astrotactin-2-like
KO
K24479
astrotactin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
130205009
Domain-containing proteins not elsewhere classified [BR:
pswi04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130205009
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
ASTN_1_2_N
ASTN1_2_fn3
Annexin_2
ASTN_2_hairpin
MACPF
FXa_inhibition
GRP
cEGF
Motif
Other DBs
NCBI-GeneID:
130205009
NCBI-ProteinID:
XP_056288075
LinkDB
All DBs
Position
15:complement(14666690..14916127)
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AA seq
1360 aa
AA seq
DB search
MARVVLPHLRVLLAGIFLAWTLTVRANRGATAPNQERDKESDAEALCEVKAVTVSTLPVL
RENEFSFTGGASGSVAGGWAAAGAGVGGGGTGGGGGGGAAAGGGESRLLLFVRTDLPGQI
SVMDDLDNTALPYFTLEMSGTGEEISQVHWKQQWLENGTLYFHVSMTESEILAQTTRATA
REPAHGLHEHMLHISVMGGLIALLLLVLLFTLVLYTRHRWCKRRRIPQKSASTEATHEIH
YIPSVLLGPQGRDSYRGSRGTHQHGNSVIGMPIRETPILDDYDCDEEDTGGHSLNSTPNQ
LHTKLCDGKAQEDYGVNIGIGGHAGILCKDNDIKHHFEKRAIDPNTESVEDLMQRFQDSF
RVPNTPTDMSHYQHVIHSSSTGRRRVPSHTRAPGGVFGPQGESGSEPEDDSQMKFYTEQH
RGRRRSKGHPHSPLNKVTLTLITISTCAIAIVYATQDSCPLTVKVTLHVPEHFVADGSSF
VVSMGSSLDVTNWLNPAKLTLYYQTNSSTQWVLDYCGQRTTEPCEQICDQDTGECSCHEG
YSPDPVHKHLCVRSDWGRNEGPWPYANLEKGYDLVTGEQAPERIFRSFYSLGQGLWLPVS
KSFVVPPVELSINPIASCKTDVLVTEDPGEVREEAMMSTYFETVEDLLASFGPVRDCSKD
NGGCKKNFKCVTDRQLESSGCMCPEGLRPMKDGSGCYDYSRGIDCTDGFNGGCEQLCLQQ
VVPLKDDPGSSNVLMLCGCVQEYKLAGDGRSCLLLSDNCEGPKCPRQDVHFNDTLFGEML
HGYDNKTKQVNLGQIFQMTFRDNNFIKDFPQLADGLMVIPLPVEEQCRGVLSEPLPNLQL
LTGDAQFSEAGGYPMVQQWRVRSNLYKVKLSSITLSTGFSKVLKTLSAESTREELLAFLQ
QYGSHYVSEALYGSELSCSIYFPSKKAQQQLWLQYQKEATDQGVGGGGRRELKSVPFISY
LSALQKSQLLSDDMVNGVEIRCEEKGSCPAGCHLCHHQAVMGGVSGRGRTGNSRSGEQPS
PIPVLLEVSRVVPLYSLVQDNVTKEAFKSATMSSYWCAGKGDVIDNWCRCDLSAFSKDGL
PNCSPLRQPTVRLAPYLEPSSTMVALEWIDVEPLIGCKVSDYIIQHKRIEDPSEAEVYTG
EVLSLVDDLFSGLGSSCVVAGKRTGDHPHSVLYSVVFKCLESDSLYKFTLRAVDSRGSSS
ESSFVSVRTSCPMVDDSRAEEIADKVYNLYNGYTSGKEQQMAYNTLMEIPPPLLYRVQHH
YNSHYEKFGDFVWRSEDELGPRKVNLILHRGERISHYCRSLLRSTHIQSRTDTMAYVYCR
SEEGRPPSNTWHGSLHESRTACIEKLISVQRNTYSNTKLR
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggcgagggtcgtactgccgcacctccgcgtccttctcgcggggatcttcctggcgtgg
accctgacggtccgagcgaacagaggggcgacggcgcccaaccaagagcgggacaaagag
agcgacgcggaggcgctgtgtgaggtgaaagccgtcaccgtctctaccctgcccgtgctc
cgggagaacgagttcagcttcaccggcggagcctcggggagcgtggccggtggatgggct
gctgccggagcaggtgttggcggaggaggaactggtggtggtggaggaggaggagcagca
gcaggagggggggaatcccgactactgttattcgttagaacagatctacctggacaaatt
tccgtaatggatgatcttgacaacacagctctcccttacttcaccctggagatgtcaggt
acaggggaagaaatttcccaggtgcactggaagcagcagtggttggaaaatgggactctg
tacttccatgtgtccatgaccgagtctgagattctagcccagacaacacgagccacggcc
cgggagccggctcacggcctgcacgaacacatgctgcacatctcggtgatgggaggcctc
atcgccctcctccttctagttctcctcttcaccctcgtcctgtacacccgccaccgatgg
tgcaagcgccgacgcatcccccagaagagtgccagcaccgaggccacccacgagatccac
tacattccctctgttctgctcgggccacagggccgcgacagctaccggggctcccggggc
acacaccagcatgggaactcggtcatcggcatgcccattcgggaaacccccattctcgac
gattacgactgcgacgaggaggacacaggtggacactcgctcaactccacgcccaaccag
ctccacaccaagctgtgcgatgggaaggcccaggaggactatggcgtcaacattggcatc
ggagggcacgcgggcatcctgtgcaaggacaacgacattaagcaccattttgaaaaacga
gccattgacccaaacacggagtcagtagaagatttgatgcagaggttccaggacagtttc
cgtgttcccaacacgccaacagacatgtctcactaccagcatgtcattcacagctcatcc
acgggccgccggagggtccccagccacaccagagcacctggaggtgtgtttggtcctcaa
ggggagtcgggctcagaacctgaagatgacagccaaatgaagttctacacagagcagcac
agagggcgaaggcgcagcaaaggccacccacacagtcctctgaataaggtcactctgacg
ttgattaccatcagcacatgtgcaattgccattgtctatgcgacgcaggattcctgcccc
ctcaccgtcaaggtcaccctccatgtgccggagcattttgttgcagatggaagtagtttt
gtggtgagcatgggcagctccctggatgttactaattggctcaacccagccaagctaacg
ctgtactatcagaccaactcttctacacagtgggtcctggactactgtggccagaggacc
acagagccctgcgagcagatttgtgatcaggacacaggagagtgcagctgtcacgagggt
tattctcctgatcctgtccataaacacctctgtgttcgcagcgactggggtcggaacgaa
ggtccttggccatatgctaatctggagaaaggctatgacctagttacaggggagcaggcc
cccgagaggatcttcagatcattctacagtctgggccaaggcttgtggctgccagtcagc
aagagcttcgtggtgccaccagtggaactgtcaatcaaccccatcgccagctgcaagaca
gatgtgctggttactgaagatccgggagaggtcagagaggaggccatgatgtctacttac
tttgagacagtggaggaccttctggcatcttttgggccggtccgagactgctccaaagat
aatggcggttgcaagaagaactttaagtgtgtgaccgacagacagctcgaatcatccggc
tgcatgtgtcctgaggggctgaggccaatgaaggatggctcaggttgctatgactactct
cggggcattgactgcacggatggcttcaatggaggctgtgaacagctgtgtctccagcag
gtcgtgcccctcaaagatgaccccggttccagcaacgtactcatgctttgtgggtgtgtg
caggagtacaaactggcaggggatgggcgctcttgccttttgctgtcagacaactgtgag
ggacccaaatgcccaaggcaggatgttcacttcaatgacaccctgttcggtgagatgctc
catggatacgacaacaaaaccaagcaagtcaacttgggacagatattccagatgaccttc
cgggacaacaacttcatcaaggactttccccagctagccgatggtctcatggtcatcccc
ttaccagtagaggaacaatgccggggggttttgtctgagccactgcccaacctgcaactc
ctcacaggggatgcccaattcagtgaggccgggggctatcccatggttcagcagtggaga
gtgcgcagcaatctgtacaaagtcaagctcagctccatcaccttatcgacaggcttttct
aaggtgctgaagacactgtcggcagagagcacacgtgaggagctgctggcttttctccag
caatatggcagccactatgtatctgaagccctgtatggttctgagctcagctgcagcatc
tatttccccagcaagaaggcccagcagcagctctggctacagtaccagaaagaggcaaca
gaccagggggttggtggaggtgggcggcgtgagctgaagtcggttcccttcatcagctac
ctgtcggcactccagaagagccagctgttgtctgacgacatggtgaatggcgtggagatc
cgctgcgaggagaaaggcagctgtccagctggctgccacctgtgccatcaccaggccgtg
atgggaggagtgtcaggaagaggccgcactggtaacagcaggagtggagagcagccttcc
cccatccccgtgctattggaagtcagccgcgtggtgcccctctatagcctggtccaagac
aacgtcaccaaagaggccttcaagagcgccacaatgagctcatactggtgtgctggaaag
ggcgatgtcattgataactggtgtcgctgtgacctgagtgccttcagcaaagacggcctg
cctaactgcagtcccctcaggcagccaactgtacgtctcgcaccttacctggagccctca
agcacaatggtggccttggagtggatagatgtggagcctctgattggctgcaaagtttct
gactacatcatccagcacaaacgaattgaggatccctcggaggcagaggtctacacaggt
gaagttctgagcttagtggatgatctgttttctggtttgggttcatcctgtgttgttgct
gggaagaggaccggagaccatcctcactcagtgctatactcagtggtctttaagtgcctg
gaatctgacagcctgtacaagtttaccctccgtgcagtggatagccgaggcagctcctct
gagtcgagcttcgtctcagtcagaacatcctgtccgatggtggatgacagccgcgctgaa
gagatagcagacaaggtgtacaacttgtataacggctacaccagcggcaaagagcagcag
atggcctacaacactctgatggagatccctcctccgctgctatacagagtccagcaccac
tacaattcccactatgagaagtttggagattttgtgtggcggagtgaggatgagctcggc
cccagaaaagtcaacctgatactacataggggggaaaggattagccactactgccgatcc
ctcctgcgcagcacccacatccagagccgcaccgacaccatggcgtacgtctactgccga
agtgaagagggtcgacctccaagtaatacgtggcacggttctttacatgaaagtcgcacc
gcctgcattgaaaagctcatttctgtgcagcgtaacacatacagcaacacgaaactccga
tga
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