Pseudoliparis swirei (Mariana hadal snailfish): 130205030
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Entry
130205030 CDS
T09868
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205030 (rnf170)
Enzymes [BR:
pswi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130205030 (rnf170)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130205030 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_2
zf-C3HC4_2
zf-RING_5
TRAF3_RING
zf-Nse
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
130205030
NCBI-ProteinID:
XP_056288098
LinkDB
All DBs
Position
15:complement(10398621..10402740)
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AA seq
268 aa
AA seq
DB search
MEDSQCGDLDYLVQDEDTLIEGVGNQVVFAVVLSITFLAGILTLLCRQQQQNIHPENQEH
VRAVRQQLQTEQDENPQAEARQQYYTDMSCPVCLQQAVLPVETNCGHLFCGSCIVAYWRY
GTWLGAIHCPICRQMVTLLFPLFHEHTTPQRVQEEGAEPQLILTDIVDYNRRFSGQPRSY
MDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGAITYLASPFDILPEALFGLLGF
MDDFFVILLLFVYISIMYREVVTQRLNG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtcaatgcggagacttggactacctggtccaagatgaggatactctcatt
gaaggtgttggcaaccaggtcgtatttgctgtggtgctgagcatcaccttccttgcagga
attctcactttgctctgcagacaacagcagcagaacattcatcctgagaatcaagagcat
gttcgagccgtccgacaacagctccaaaccgagcaggatgaaaatcctcaggcggaggcc
aggcagcagtattacacagacatgtcttgtcctgtgtgtttacagcaggcggttctgcct
gtggaaactaactgtggacaccttttctgtggatcctgcattgtagcctactggaggtat
ggcacatggctgggtgctattcactgccccatatgcagacaaatggttacgttgctgttc
ccactgtttcatgagcacaccacccctcagagggtccaggaggagggggcggagcctcag
ttgatactcacggacatcgtcgattacaatcgcaggttctcaggccagccaagatcttac
atggacaggctgcgagatgtgcccaccctgcttcgtcatgcctttcgggagatgttctct
gtgggtggcctcttctggatgttcaggattcggattcttctctgccttgtgggagcaatc
acctacctggcctcgccgttcgacatcctccctgaggcacttttcggtctgctgggattc
atggacgatttctttgtgatcctactcctctttgtgtacatctccatcatgtacagagag
gtggtaacgcagagacttaatggttag
DBGET
integrated database retrieval system
