Pseudoliparis swirei (Mariana hadal snailfish): 130205047
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Entry
130205047 CDS
T09868
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130205047 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pswi04050
]
130205047 (edar)
Cytokine receptors [BR:
pswi04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
130205047 (edar)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
Chordopox_G3
Motif
Other DBs
NCBI-GeneID:
130205047
NCBI-ProteinID:
XP_056288128
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Position
2:13785425..13814975
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AA seq
515 aa
AA seq
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MSERRCQKKSIFLSSLLLCCMFASAEYSSCGEYEFFNLTSNSCQACPHCPSGQEPHMTCG
YGVKDDDFACVPCTHGKYSKGKYEICRRHKDCDALYKATVRAVGTPDSDAECGPCLPGYY
MLENRPRNHYGMICHSCQNAPRNTKECMLTSRPKEKAVIDPGSTTVFPHLHKDTNGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPSSQACCSGQVVKAVEAQTNKQEDKKDVPD
NVVIYSEKNELDKLKAPPQKTVKSENDASSENEQLLSRSIDSDEEAASDKQGSADANNPN
LCLVNLGNKPDLCLLSLGLLERDRSGNGAPALSAGPANNVQSPNHIASTNHISSVNAINN
NNKTPGMLQSRRKKILDLYGRACNVTEGLSPTELPFDCLEKASRMLSSSYSSEAAVVKTW
RHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESLCSDVLGS
SEMAAAAGRQGNSSFHSQLVCPSPCQSLSQRCASV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagaggagatgtcagaagaagtccatctttctgtcctcattattgctgtgttgt
atgtttgctagtgcggagtattccagctgtggagagtacgagttcttcaatctgacaagt
aacagttgccaggcctgccctcattgcccatctggacaagagccgcatatgacctgtggc
tacggggtgaaggacgacgactttgcctgtgtgccgtgtacacatgggaaatattccaaa
gggaagtatgagatctgcagacggcataaagactgtgacgcactctacaaagccactgtt
cgtgcagtgggaactccggacagcgacgccgaatgtggaccgtgtctaccagggtattac
atgctggaaaacagaccaaggaaccactacgggatgatttgccattcctgccagaatgca
ccacgcaacaccaaagaatgcatgttgaccagcaggccaaaagagaaggctgttattgac
cctggcagcacgaccgtgttccctcatctacataaagataccaacggacaaggtcacctc
gccacggctctcattatcgccatgtcaaccattttcatcatggccatcgccatcgtactc
atcattatgttttatatcctgaaggccaaaccaagtagtcaggcatgttgttctggacaa
gttgtgaaggcggtggaggctcagaccaacaaacaggaagacaagaaagatgtcccagac
aatgtggtgatctactcagagaaaaatgagttagacaaactaaaagctcctcctcagaag
acggtgaaaagtgaaaatgacgcatcgtcggagaacgagcagctgttgagccgcagcatc
gacagtgacgaggaggcagcctccgacaagcaaggatcggccgacgccaacaatcccaac
ttgtgcctcgtcaacctgggaaacaagcccgacctctgcctgctctctctcggcctcctg
gagcgggacagatccggtaacggggcccccgccctgtcagccggaccggccaataacgtg
cagagtcccaaccacatcgccagcaccaaccacatcagcagtgtgaacgcaatcaacaac
aacaataaaaccccagggatgcttcagagccgaaggaaaaagatcctggatctgtacggc
agagcctgcaatgtgacggagggcctgagccccacggagcttcctttcgactgcctggag
aaggccagccgcatgctgagctcctcctacagcagcgaggcggccgtggtgaagacgtgg
aggcatctggccgagagcttcggcctgaagcgcgatgagatcggcggcatgagcgacggc
ttgcagctcttcgagagagtgagcacggcgggttacagcatccccgacctcttgacccgc
ttagtgcagatcgagaggctcgacgcggtggagtcgctctgctcggacgtgttgggcagc
agcgagatggcggcggctgccgggcggcagggcaacagcagttttcacagccagctggtc
tgtccatccccgtgccaatctctgtcccagcgctgcgccagcgtctga
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