Pseudoliparis swirei (Mariana hadal snailfish): 130205074
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Entry
130205074 CDS
T09868
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130205074 (ppwd1)
03110 Chaperones and folding catalysts [BR:
pswi03110
]
130205074 (ppwd1)
Enzymes [BR:
pswi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
130205074 (ppwd1)
Spliceosome [BR:
pswi03041
]
Complex C
Other components
PPlases
130205074 (ppwd1)
Chaperones and folding catalysts [BR:
pswi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
130205074 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WDR55
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_2nd
WD40_MABP1-WDR62_2nd
PEP5_VPS11_N
Beta-prop_WDR75_1st
VPS8_N
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
130205074
NCBI-ProteinID:
XP_056288170
LinkDB
All DBs
Position
15:complement(19709230..19716893)
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AA seq
626 aa
AA seq
DB search
MAATENNVELKRKADDDQEGEKNGEDKEWVGPMPNEATTVKKRKVLEYERVFLENLPSAV
MYERSYMHRDVITHIVCSKTDFIITASQDGHIKFWKKKEDAGIEFVKHFRSHLGVIESIA
VSAEGALLCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQSEWIYNPGDPIFTVACSEKST
GKIFVYDGRGGNEPLHVIDKMHSSPLAQIRLNTRYRVIVSVDKAGMLEYWTGLRNDFKFP
RYVQWEYKTDTDLYEFAKNKTYPTSLTFSFDGKKMATIASDRKVRIFRFLTGKLMRVFDE
SLTMFTELQQMKQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIKV
INVETNRCVRILGKLENIRVVQLSLFQGVAKATHVAPTAEMKASVNPALDNVEQDPTIIC
TAFKKNRFYMFSKREPQDTKSADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTTM
GDIHIKLFPVECPKTVENFCVHSRNGYFNSHIFHRIIKGFMIQTGDPTGTGMGGESIWAR
EFEDEFHATLRHDRPYTLSMANGGPGTNGSQFFVTVVPTPWLDNKHTVFGRCTKGMEAVQ
RICNLKVNPKTDKPYEDISIINITVK
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactgaaaacaatgtggaacttaaacgaaaagccgatgacgaccaggaggga
gaaaagaatggagaagacaaagagtgggtcggacccatgccgaacgaagctaccacggtg
aagaaaagaaaagtcctcgaatatgagcgcgtgtttctggagaacctcccctcagctgta
atgtatgaacggagctacatgcacagagacgtcatcacacacatagtttgttccaagaca
gatttcattatcacggccagccaggatggccatatcaagttctggaagaagaaggaagat
gcgggaattgagtttgtcaaacactttcgcagccacctcggcgtgatcgaaagcatcgcc
gtcagcgccgaaggagctctgctctgttctgtcggtgacgatcaggccatgaaagtgttt
gacgtcgtcaactttgacatgatcaatatgctgaagttgggctttcacccaggccagtct
gagtggatctacaatcccggggatcccattttcacggtggcgtgctcggagaaatccacg
gggaagatcttcgtctacgacggccgggggggcaacgagcccctccacgtcatcgacaag
atgcactcctcgccgctggcccaaatccgcctgaataccagatacagagtcatcgtctcc
gtcgacaaggccggcatgctggaatactggactggcctccggaatgatttcaagtttccc
agatacgtgcaatgggaatacaaaacggacacggacttgtacgagtttgcgaaaaacaaa
acgtatcccaccagcctcacgttttctttcgatgggaagaaaatggccaccatcgcctcg
gacaggaaagtccggatcttccgcttcctcaccggaaagctaatgagagtgttcgatgag
tcgttaaccatgttcacggagctgcagcagatgaagcagcagctgcccgacatggagttc
gggaggcggatggccgtggagagagagctggagaaggtggacggcatccggctgaccaat
atcatcttcgacgagaccggccacttcgtgctctacggcacgatgctgggcatcaaggtc
atcaacgtggaaactaacaggtgtgtgcggatcctcgggaagctggagaacatccgcgtg
gtccaactcagcctgttccagggggtcgcgaaggccacccacgtggctcccaccgcggag
atgaaggcctccgtgaacccggccttggacaacgtggagcaggacccgaccatcatctgc
accgcgttcaagaagaaccgcttctacatgttctcaaagagggaaccacaggacacgaag
agcgcagactcggaccgagacatctttaacgagaagccctcgaaggaggaggtgatggcc
gccacgcaggccgagggccccaagagggtgtcggacagcgccatcatccacaccaccatg
ggagacatccacatcaagctcttccccgtggaatgccccaaaaccgtggagaacttctgc
gtccacagcaggaacggctacttcaacagccacatcttccaccggatcatcaagggcttc
atgatccagacgggagaccccacgggcaccggcatggggggcgagagcatctgggccagg
gagttcgaggacgagttccacgccacgctgagacacgaccgcccgtacacgctcagcatg
gccaacgggggccccggcaccaacggctcgcagttcttcgtcaccgtcgtgccgaccccg
tggctcgacaacaagcacacggtgttcggacggtgcaccaaaggcatggaggcggtccag
aggatctgcaacctgaaggtgaaccccaagaccgacaaaccgtacgaagacatcagcatc
atcaacatcaccgtcaagtga
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