Pseudoliparis swirei (Mariana hadal snailfish): 130205079
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Entry
130205079 CDS
T09868
Symbol
lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130205079 (lhx5)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
130205079 (lhx5)
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GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130205079
NCBI-ProteinID:
XP_056288177
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Position
15:complement(19596233..19685295)
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AA seq
396 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFRRF
GTKCAGCAQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVVDENKFVCKEDYS
SSGAIKEVNLNSVSSCTDRSLSPDLQDPTQDDIKETDNSTSSDKETNNIENEEQNSGTKR
RGPRTTIKAKQLETLRAAFVATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHTFFRGPRRMRPLGGRLEDPDILGPGAYGYYGEYQGDYYGPGSNYDFFPHGP
PSSQAQSPAESPYIMSSGPGPMEGSGHHPSDDQRFTDMISHAETPSPEPGLPGSLQPVPG
EAYGGGPSPPFSLASNSSYSAPMSHQGQEMGETAAW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatggtccactgcgccggctgcgaacggcccatcctggaccggttcctcctcaacgtg
ctggaccgcgcgtggcacgccaagtgcgtccagtgctgcgagtgcaactgcaacctcacc
gagaagtgcttctccagggacgggaagctctactgcaaaattgactttttcaggcggttt
ggcacaaagtgcgcgggctgtgcgcagggcatctcgccgaacgacctggtgcgcaaagcg
cgcagcaaggtgttccacctgaactgcttcacctgcatggtgtgcaacaagcagctctcc
acgggagaggagctctacgtggtggacgaaaacaagttcgtgtgcaaagaagattactcg
agctccggggccatcaaggaagtcaacttgaactcagtgtcgtcgtgtacagataggagt
ttatcgccggatctgcaggacccaacacaggacgacataaaggagacggacaattccacg
tcctcggataaggaaacgaacaatattgagaacgaggagcagaactcggggaccaagagg
cgcgggccccggaccaccatcaaggccaagcagctggaaacgttaagggccgcgtttgtg
gccacgccgaaacccacccggcacatccgggaacagctggcccaggaaacgggactgaac
atgcgcgtgatccaggtctggttccagaaccggagatccaaagagcggcggatgaagcag
ctgagtgctctgggagcccggcggcacaccttcttcaggggcccgaggaggatgaggccc
ctggggggccggctggaggatccggatattttgggacccggggcctacggctactacgga
gaataccaaggcgactactacggaccggggagtaactacgacttcttcccccacggcccc
ccgtcctcgcaggctcagtctccggccgagtccccttacatcatgtcctcgggccccggg
cccatggagggctcgggccaccacccgtcagacgaccaaaggttcacggacatgatctcc
cacgcggagaccccgagtccggagccgggcttaccgggctccctgcagccggtcccgggg
gaggcttacgggggcggacccagtcctcctttctccttggcgagtaactccagctacagc
gctcccatgtcccaccagggccaggagatgggggagaccgccgcctggtga
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