KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130205096
Entry
130205096         CDS       T09868                                 
Name
(RefSeq) AF4/FMR2 family member 1-like isoform X1
  KO
K15184  AF4/FMR2 family member 1
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pswi03021]
    130205096
Transcription machinery [BR:pswi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     130205096
SSDB
Motif
Pfam: AFF4_CHD AF-4 AF4_int
Other DBs
NCBI-GeneID: 130205096
NCBI-ProteinID: XP_056288203
LinkDB
Position
15:16961372..16975708
AA seq 1157 aa
MASESSTYNEERNRLRLRAWEQRNQETSQAKELNFETVPLFGVPYKTNKGDELSNRIQGM
LGSYEDVNNPYPFAIEPLPIPTCVTFSHSDQGPPNTDKPTKPPFHNQIQYVSTQSQKAPS
SDIYNSQPVRSSTASSPHHHGHSSTFSNVSLNHSQLSISAHQQKRSEAHSELKQCVGLSR
EMSSQSPDAELLPFPHSSDHDDKDMDVSTFNLKQSPSEASLSQANKGNALPSQTFPSLLS
SKQPSVVMTKKPTAYVRPMDGQDQVVSESPELKSSPEPYVPLPELINKSDLGILETSSNE
VLCVQDILREMIFSLPPLLTPIHSPIPDEPSKSLFQAKEAERVSSCPGKKNYESSPADPS
QLIQQSSSARSFEAAHIRGVESTSSSDSESSSRSESESDCAIEEPTLLPVSNLNVKTKPD
APAVTHGDWQLGNWIRSSQQNAGAESQSAAHASEGPAHKQPPLSHSSKLLASVEVADPTR
ASKPQLSTRQRDFPDRVAKLQQHREIPQDIYNHQSSQLSPLGDFNSCSSTRKLPLNKHSS
IPERAGCPDRAEAATAVKCEEVVATQDKEPCSTDRPKVKTKTGRGKKSKDKSDTKRDGKR
TSQCTALDKRKAAEEPELPAVPCGHCPLCGVQYPMRCSCPTQSHTQPDLLSPVRLLEISS
SKEKSESLCQRGPKPPHKTTHKNSEKTRPIAKSCRDPHRPSRSLLVKIDLRLLSRVPPTL
DNHQETPVPAKRPALVIEQDGGGRDASTTHKPPKTSAKSKPQNVEVVNATHPKKKQRLEN
KNTSSNRASVKLERSCNSKEDRDQKKAKKTPCPLQQPLTPRDPVKGPKSHKRTFGETKES
SEAGVTRKDSNTKHKKSSGKHTDPPRAEKKPPKSSVDIPSSSQATRDPLSSRPLFRLEER
QYPVKHYIKEAKKLKHKADAESDKLSKAFNYLDAAMFFVESGIAMEKDPHVSMSSYTMFA
ETLELLKFVLKLKNSEDVSASPSEKDFLSLCLKGQSLLQMAMFRHKQKIALKYSKTLTEH
FSNSTAPHASVVSLKVTDTPPSHTPTMPSPANTSSGPGSNLSVGGSAVDPAAGSAATVLV
PHAIGQVAFTYVNITMLFLSAHDIWEQAEELAHGGSGVLTELDAAIGPLSLASSMSSLVG
YTRRAVHWLRLDSRKVK
NT seq 3474 nt   +upstreamnt  +downstreamnt
atggcatctgagtcgagtacatacaatgaggaaaggaaccgtcttcgcctccgtgcatgg
gagcagaggaaccaagaaacaagccaagccaaagaactcaactttgagactgtgccgctc
tttggggtaccatacaagacaaacaaaggggatgagctttccaatcgaatccaggggatg
cttggcagctatgaagatgtgaataatccatatccctttgctattgagccattacccatt
cctacttgtgtaaccttctcacactcagatcagggtccgccaaacacagataagccgacc
aagccgccattccataaccaaatccagtacgtgtccacccaaagtcagaaagccccatct
agtgacatctacaactctcagccggtgaggtcgtccactgcctcttctcctcaccatcat
ggacattcatccactttctcaaatgtttctttgaaccacagtcagctcagcatctcagca
catcaacaaaagaggagtgaagcccactcggagctcaagcagtgtgtcggcctttcccgt
gaaatgtcttctcagtctcctgatgctgagctgctccctttcccacattccagtgaccat
gatgacaaggacatggatgtttccacttttaacctgaagcagtcccccagcgaagcgtct
ctgtcccaagcaaacaagggtaatgcactaccttcccagaccttcccgtcactcctgtcg
tcaaagcagcccagcgtggtcatgaccaagaagcccacggcgtatgtgcggcccatggat
ggtcaggaccaggtggtcagcgagtcacctgagttgaagtcttcaccggagccatatgta
ccgctacctgagttaatcaacaaatctgatctaggcattttggagacgagttcaaatgaa
gttctatgtgtgcaggacatcttgagggagatgatcttctcgttgccccctctcctgaca
cctattcactcacctatccccgatgaaccctccaagtccctgttccaagccaaggaagcc
gagcgtgtctcttcatgtccaggaaaaaagaactatgagagctctcctgcagatccatcc
cagctcatccagcagagctcctcagctcgttcatttgaagcggcacatatcagaggggta
gagtccaccagctccagcgactcggagagtagctcaagatcagagtcggagagtgactgc
gccatcgaggagccaactctgctccctgtgagtaacttgaacgtcaaaaccaagcctgat
gctccagcagtgacgcatggcgattggcagttgggaaactggatccggtcaagtcagcag
aacgccggcgctgagagccaaagcgctgcacatgcctccgagggccccgctcacaagcag
ccaccgctcagtcatagctcaaagctcttagccagcgtagaggtcgccgaccccaccagg
gcgtccaaacctcagctttcaactcgccagagagacttccctgatcgggttgcaaagctc
cagcagcacagggaaatccctcaggacatctacaaccaccaaagtagccaactatccccc
ctcggtgatttcaacagctgtagcagtaccaggaaacttccattgaacaagcactcgtca
ataccagagagggcaggttgcccagatcgcgctgaagcagctaccgctgtgaagtgtgag
gaagtcgtcgccacgcaagacaaagagccctgttccacagatcgacccaaggtaaagacg
aaaacaggacgtggcaagaaaagcaaggataaaagtgacactaaaagagacggcaaaagg
acttcacaatgcacggcgcttgacaaacggaaggctgcagaagagccggaactcccagcg
gtcccgtgtggtcattgtccattatgtggggtacaatatccgatgcgctgctcctgcccc
acacaaagtcacactcagcccgacctgctgtctccagtccgactacttgaaatcagtagt
agcaaagagaagtctgagagcctctgccagagggggcccaagcctcctcacaaaacaaca
cacaagaactctgagaagactagaccgatagccaagagttgtcgtgacccccacaggcct
tcgagatctctgctggtgaagattgatctaagactcctctcgcgagtgcccccgaccctg
gacaaccaccaggagacccccgtccctgcaaagagaccagcactggtcatagagcaagat
ggagggggcagggatgcttccactacacacaaaccccccaaaaccagcgcaaagagtaaa
cctcaaaatgttgaggtagtcaatgcaactcatcccaagaagaaacagaggctggaaaac
aagaatacctcatcaaatcgtgcttctgtcaaactggaacgttcctgcaattccaaagag
gaccgagatcaaaagaaggcaaagaaaaccccttgtcctttgcagcagcctctgaccccc
agagaccccgtcaaaggcccgaagtcgcacaaacgcacttttggggaaaccaaggagtcc
agtgaggcgggagtgacgcgcaaggactcgaacacaaagcacaagaagagcagcggaaag
cacacggacccgccgcgtgctgaaaagaagccgcccaagagcagcgtggacatcccatcg
tcttcacaggccacccgggaccctttgagcagcaggcccttgttcagattagaggagagg
cagtatccggtaaagcattacataaaggaggccaaaaaactgaagcacaaagccgatgca
gagtccgataagctcagtaaagctttcaactacttggacgcggccatgttctttgttgaa
agtggcattgccatggaaaaagatcctcacgtttcaatgtcttcctacactatgtttgca
gagacattggaactgctcaagtttgtactgaaacttaaaaattcagaggacgtctctgct
tcaccttcagaaaaggactttttatctttgtgtctgaagggccagtctctgctgcagatg
gccatgtttcgccacaagcaaaaaattgcactcaagtattcaaagactctcactgaacac
ttcagtaactcaaccgctccccacgcctctgtcgtatcactaaaagtgacggacacgccc
ccgtcccacacccccaccatgccgtctccggccaacacgtccagcggccccggctccaac
ctcagcgtcggcgggtcggccgtggacccggccgccggctccgccgccaccgtgctggtt
ccccacgccatcggacaggtggcgttcacctacgtcaacatcaccatgttgttcctgagc
gctcacgacatctgggagcaggcggaggagctggcacacggaggcagcggcgtgctgacg
gagctggacgccgccatcggcccgttgagcctcgcgtccagcatgagctcgctggtcggc
tacacgcggcgggccgtccactggctgaggctggacagccggaaggtaaagtga

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