Pseudoliparis swirei (Mariana hadal snailfish): 130205097
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Entry
130205097 CDS
T09868
Symbol
tpm2
Name
(RefSeq) tropomyosin beta chain isoform X1
KO
K10374
tropomyosin 2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04260
Cardiac muscle contraction
pswi04261
Adrenergic signaling in cardiomyocytes
pswi04814
Motor proteins
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
130205097 (tpm2)
04820 Cytoskeleton in muscle cells
130205097 (tpm2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205097 (tpm2)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
130205097 (tpm2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
PUMA_CC
Laminin_I
ATG16
GAS
CENP-F_leu_zip
Crescentin
Nuf2_DHR10-like
XhlA
ERM_helical
DUF745
TMF_DNA_bd
DUF1664
MscS_porin
DUF3450
SlyX
FPP
Fib_alpha
DUF16
DUF5917
Lebercilin
DUF6317
Alanine_zipper
Fez1
TMP_N
ADIP
Suppressor_APC
CCDC22_CC
EzrA
FH2
Spectrin
Vps5
NPV_P10
Golgin_A5
HR1
DUF4200
Motif
Other DBs
NCBI-GeneID:
130205097
NCBI-ProteinID:
XP_056288206
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All DBs
Position
15:1721841..1737741
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AA seq
284 aa
AA seq
DB search
MEAIKKKMQMLKLDKENAIDRAEQAEGDKKGAEDKCKQLEEELQGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggccatcaagaagaagatgcagatgctgaagctggataaggagaacgcgatagac
cgggcggagcaggccgagggcgacaagaagggcgcggaggacaagtgcaaacagctggag
gaggagctgcagggtctgcagaagaagctcaagggagtcgaggatgagctggacaaatac
tccgagtcgctgaaggacgcccaggagaagctggagcaggccgagaaaaaagcaacagac
gcagaggcagaagtggcctctctaaacaggcgcatccagctggtggaggaggagctggac
cgagctcaggagagactcgccaccgcgctgcagaagctggaggaggcggagaaagctgct
gatgagagcgagagaggaatgaaggtcattgagaacagggcgtcgaaggacgaggagaag
atggagatccaggagatgcagctgaaggaggccaaacacatcgcggaggaggccgaccgc
aaatatgaagaggtggcccgtaagctggtgatcctggagggcgacctggagcgctcagag
gagcgagccgaggtggcggaggctaaatcaggtgacctcgaggaagagttgaaaaatgtc
accaacaacttgaagtccctggaagcccaggcggagaagtactcacaaaaggaggacaaa
tacgaggaagagatcaaagtcctgactgacaagctgaaggaggccgagactcgtgcggag
tttgctgagaggtctgtggccaagctggagaagaccatcgacgacctggaagacgaggtg
tacgctcagaagctgaagggcaaggccctcagcgaggagctggacctggccctcaacgac
atgaccaccctgtag
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