KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130205097
Entry
130205097         CDS       T09868                                 
Symbol
tpm2
Name
(RefSeq) tropomyosin beta chain isoform X1
  KO
K10374  tropomyosin 2
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04260  Cardiac muscle contraction
pswi04261  Adrenergic signaling in cardiomyocytes
pswi04814  Motor proteins
pswi04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    130205097 (tpm2)
   04820 Cytoskeleton in muscle cells
    130205097 (tpm2)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    130205097 (tpm2)
   04261 Adrenergic signaling in cardiomyocytes
    130205097 (tpm2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pswi04812]
    130205097 (tpm2)
Cytoskeleton proteins [BR:pswi04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Tropomyosins
     130205097 (tpm2)
SSDB
Motif
Pfam: Tropomyosin CLZ CCDC39 HmpF PUMA_CC CEP135_TSGA10_CC Laminin_I CCDC170_1st ATG16 CC_Bre1 Rod_CreS GAS FKBP15 CENP-F_leu_zip Nuf2_DHR10-like CLIP1 XhlA ERM_helical DUF745 Sec2p Pex17 Exonuc_VII_L TMF_DNA_bd HAUS1 DUF1664 SCD2_helical_N LEKR1 MscS_porin DUF3450 SlyX Fib_alpha FPP DUF5917 DUF16 BNI5_helical Lebercilin ODF2_C CEP128 Fez1 Alanine_zipper Tuftelin_like PEA2_C CCDC18_1st CCDC170_2nd Vps5 Suppressor_APC TMP_N CRWN_N FH2 CCDC22_CC T1-F NPV_P10 Golgin_A5 ENTR1 DUF4200 Cnn_1N
Other DBs
NCBI-GeneID: 130205097
NCBI-ProteinID: XP_056288206
LinkDB
Position
15:1721841..1737741
AA seq 284 aa
MEAIKKKMQMLKLDKENAIDRAEQAEGDKKGAEDKCKQLEEELQGLQKKLKGVEDELDKY
SESLKDAQEKLEQAEKKATDAEAEVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRASKDEEKMEIQEMQLKEAKHIAEEADRKYEEVARKLVILEGDLERSE
ERAEVAEAKSGDLEEELKNVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDEVYAQKLKGKALSEELDLALNDMTTL
NT seq 855 nt   +upstreamnt  +downstreamnt
atggaggccatcaagaagaagatgcagatgctgaagctggataaggagaacgcgatagac
cgggcggagcaggccgagggcgacaagaagggcgcggaggacaagtgcaaacagctggag
gaggagctgcagggtctgcagaagaagctcaagggagtcgaggatgagctggacaaatac
tccgagtcgctgaaggacgcccaggagaagctggagcaggccgagaaaaaagcaacagac
gcagaggcagaagtggcctctctaaacaggcgcatccagctggtggaggaggagctggac
cgagctcaggagagactcgccaccgcgctgcagaagctggaggaggcggagaaagctgct
gatgagagcgagagaggaatgaaggtcattgagaacagggcgtcgaaggacgaggagaag
atggagatccaggagatgcagctgaaggaggccaaacacatcgcggaggaggccgaccgc
aaatatgaagaggtggcccgtaagctggtgatcctggagggcgacctggagcgctcagag
gagcgagccgaggtggcggaggctaaatcaggtgacctcgaggaagagttgaaaaatgtc
accaacaacttgaagtccctggaagcccaggcggagaagtactcacaaaaggaggacaaa
tacgaggaagagatcaaagtcctgactgacaagctgaaggaggccgagactcgtgcggag
tttgctgagaggtctgtggccaagctggagaagaccatcgacgacctggaagacgaggtg
tacgctcagaagctgaagggcaaggccctcagcgaggagctggacctggccctcaacgac
atgaccaccctgtag

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