Pseudoliparis swirei (Mariana hadal snailfish): 130205098
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Entry
130205098 CDS
T09868
Name
(RefSeq) LOW QUALITY PROTEIN: calmodulin-regulated spectrin-associated protein 1-B-like
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pswi01009
]
130205098
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205098
Protein phosphatases and associated proteins [BR:
pswi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130205098
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130205098
Intermediate filaments
Intermediate filament-binding proteins
130205098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
130205098
NCBI-ProteinID:
XP_056288214
LinkDB
All DBs
Position
15:complement(17108695..17128663)
Genome browser
AA seq
1611 aa
AA seq
DB search
MDVEVSAGRDSTWRRRAAAAAADDAGGAGMEAQVVPLELYDSARAKIDANLRWLFAIAYG
IDHIPADLRNPFYTDQYEQEHIKPSIIRQLLSGELYCRVCGLILLAEQAASLQSHQAVLQ
ALSRKGIYVLEADNMPVSDLDLSSASIKMSSHIHLIDALMMAYIVEMISVEKVVSSVKRF
XNFSASKDLPFDLEDAMVFWINKVNTKMREIMGKELKMKQHLLESPGHQKPDTLHALASY
LLEPVEFSRMVRYRRDHMSGRALQHFPLLDDLMKDVCDGTALLAVIHFYCPELIRLEDIC
LKEVPSIADSMYNIQLLQEFSHEYLNKCFYLKPEDMLYSPPVLKNNVMVFIAELFWWFEI
GKPDFVQPRDLHEIRDVRLLLQPKTSRSHIPISNVTKRSFLTSSNSADILTTPPGPDPSS
RPGSVSTSHSLLPLRQRQQKVAEESTPGLGNRSDSLTCDAQHQGSILAWPERRPRPLSQP
VPYALHCPLEDDADSISLARSISKDSLASNILSMTPKHMPGAQLPQNRLSVQSLLSHMRI
EDEEEEIEEEELVAVIHPSALPRCRLGSDMEQDELEIPSAPSTSRVSNTRCSPRLDVGPD
GYYLEPLMPAISKPAKEKSISLNKEEESGESRCKATAAARKAAISAPRRAPAAELNKSTF
TPIPVAESVRRSLRPPTEGSSGTAQPEKKQSSGFFLHSSAEAETPSTALEMGQDSDSDIA
DLEEDNEEDEQMALTKEVLRRGKGAFLEEGEGREFGEGESAKLREDLKVSERDDKEGGSG
RSSPCLSTASWASSCSASCSTSVKMTSFAERKLLKLGLRDGFSSTSSSQKTTPDGSEVAP
CSPWQVRSDTTLGWLGKEPSSVLGKNLAVSPPVVPSELLQLHMQLEEQRRAIEYQKKKME
TLSARQRLKLGKAAFLNIVKKGGGKSETLPLPLKHSTPFSELSDRSHMKTQSCRDDSCLA
ALKVEARAGQTEGETNRSNKLPQDNGAEPDLNECSHSIELLNNAMSSIQQQMMQLSFQQD
QLMKRVASPPQPPVKRAASPPQPPVKRAASPPQPPVKRAASPPQPPVKRAAPSPEPPMKC
AVSPPERVESSASTTTHSTSPPSDSRSFAVHFVDITGGPAASARRPPKLSSGKRSKTSEL
KQSREDSKMAAVKSHSQSLEGGDGSGRFQERSIVESSRPETSVQRNSTFRVGGDPEQRDG
EGAESLSGNALTSQAAEHEENTRREAVGGEENTRVQVDQSELTDPLAADCTADGEQKNVI
GYFFKDEEKAEEKAEDEMAKRRNAFLLKQQRKAEEARLRKQHQEVESEVKRDEARRKAEE
DRVHKEEEKARREIIKQEYLQRKQEALMEEQGLVKPRPHTKSSRSRPKSLHRAESSSLSK
GSTTRNSLKKSLLIKAQGSAAGCRAADLSRSYRGSTLSLATEADSVISGGEESQSAGSVC
SVESFPVLSRASSRNLERDWESGSIASSITSTEYNGPKLFKEPSSKSNKPIIINAIAHCC
LAGRVNETQKNVILEELEKCESNHLIILFRDGGCQFRGIYSYSPDTEEIVKYTGTGPRAI
GRKMIDKLFKYSSERKQFNVVTAKSVSVSVDALTIHNQLWHVKRPGSARRK
NT seq
4836 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggaggtgagtgctggcagggacagcacctggaggaggagggcggcggcagca
gcggcagatgatgcgggtggagcaggcatggaggcgcaggtcgtgccgctggagctctac
gactccgcacgagccaaaatagacgcaaacctccgctggttgttcgccatagcttatggt
atagatcacatccctgcagacctgcggaatcccttctacaccgaccagtatgagcaggag
cacatcaagccgtccatcatccgccagctgctgtccggggagctctactgccgggtgtgc
gggctcatcctgctcgccgagcaggccgcctcgctccagagccaccaggctgtcctccag
gccctgtccaggaagggcatctacgtcctggaggcagacaacatgccggtctccgatctg
gacctcagctcggcttccatcaagatgagctcccacatccacctcattgacgcgctgatg
atggcctacatcgtggagatgatcagcgtcgagaaggtggtgtccagtgtcaagcgtttt
ncgaacttcagtgcctccaaggacttgccttttgacctggaagacgcgatggtcttctgg
atcaacaaggtgaacacaaagatgagagagatcatgggaaaagagctgaaaatgaagcaa
catttgctggagtcaccgggtcaccagaagcctgatacgctgcatgctctggccagctac
ctattggagcctgtggagttctctcgcatggtgcgttaccgcagagatcacatgtcgggt
cgagcacttcagcacttccccctgctggatgacctcatgaaggatgtgtgtgacggcacc
gctctgctggctgtgatccacttctattgcccagaactcattcgactggaagatatctgt
ctgaaggaggtcccctccatagcagacagtatgtacaacatccagctgctacaagagttc
tctcacgagtacctgaacaaatgcttctatctgaagcccgaggacatgctgtattctcca
ccggtactgaagaacaacgtgatggtcttcatcgctgagctcttctggtggtttgagatc
gggaagcccgactttgtgcagcccagagaccttcacgaaatcagagatgtgagattgctg
ctgcagcccaagacttcacgatcccacattcctatctccaacgtcaccaagcggagtttc
ctgacgtcatccaactcggcagacatcttgaccacgcccccgggtcccgaccccagcagt
agaccaggctccgtgagcacatctcactctttactgccgctgagacagagacaacagaaa
gtggctgaggagagcactccagggctgggaaatcggtccgactctctgacatgtgatgca
cagcatcagggctcaatactggcgtggcccgagaggaggccgaggcctttatcccagcca
gtgccctacgccttgcactgccccctggaggacgacgcagacagtatcagcctcgctcgc
tccatcagcaaagacagcctggcctccaatatactgagcatgacccccaaacacatgccg
ggagcgcaactgcctcaaaacaggctaagcgttcaaagcctgctgagtcacatgcgcatc
gaggacgaggaggaggaaatagaagaggaggagctcgtcgctgtgatccacccttctgcg
cttcctcgatgtcggcttgggagcgacatggagcaggatgagttggaaatcccgagtgcg
ccgtccacctccagggtttccaatactcgttgctccccccgcctcgacgtgggtcccgac
ggctattatctggagccgttgatgccggccatctccaagccagccaaagagaagagcatc
agcctgaacaaggaggaggagagtggcgagagtcgctgtaaagccacagcggctgcgagg
aaagcagccatcagtgcccccaggagagcccccgcggccgagttaaacaaaagtaccttc
acgcctatacctgtggctgaatcagtccgccgctctctcaggcctcccacagaggggtcg
tcaggcaccgctcagcccgagaagaagcagtcctccggcttcttcctccattcgtcggcc
gaggcagaaactccttccactgcgcttgaaatgggccaagactccgactctgacatcgcg
gacctcgaggaagacaacgaggaggacgagcagatggcgctgacgaaagaagtcctgagg
agaggaaagggagcgttcttagaggagggggagggccgtgaatttggagagggcgagtcg
gccaaactgagagaagacctgaaggtgagcgagcgggacgataaggaaggcggcagtgga
cgctcgagcccttgcctcagcaccgcgtcgtgggcgagcagctgcagcgcgtcgtgcagc
accagcgtcaagatgaccagcttcgcagagagaaagctcctcaaactcggcctccgggat
ggattctcgagcaccagcagttctcagaagaccacaccggatggttctgaggtcgccccc
tgctccccctggcaagtgaggagtgacaccaccttgggctggctaggaaaggagcccagt
tctgttttggggaagaacttggcggtgagccccccagttgtgccttcagagctgctgcag
ctccacatgcagctcgaagagcagcggcgagccatcgagtaccagaagaagaagatggag
accctgtcggcgcggcagcggctgaagctcggcaaagctgccttcttgaacatcgtgaag
aagggcggagggaagagtgaaacgcttcccctgcccctgaaacactcaacgcccttctca
gagctaagtgacaggagtcacatgaagacccagtcgtgtcgggatgactcgtgtctcgct
gctctgaaggtggaggcaagggcaggtcagaccgagggggagacgaacaggagcaacaag
ctgccccaggacaacggggccgagccggacctgaacgagtgttcccactccatagagctt
ctcaacaatgccatgagttccatccagcagcagatgatgcagctgtctttccagcaggac
cagctgatgaagcgggtggcgtcacctccacagccgcctgtgaagcgggcggcgtcacct
ccacagccgcctgtgaagcgggcggcgtcacctccacagccgcctgtgaagcgggcggcg
tcacctccacagccgcctgtgaagcgggcggcgccatcccccgaacccccgatgaagtgc
gcggtgtcgcctccagagcgagtagaatcgagcgccagcacaacgacacattccacgtct
cctccctcggactcgaggtcgtttgcggttcacttcgtggacatcaccggcggccccgcc
gcctcggctcgccgcccgcccaagctcagctccggcaaacgcagcaagacctcggagctg
aaacaaagtagagaggacagcaagatggccgccgtcaagtcgcattctcaatccctggag
ggcggagacggttctggtagattccaggagaggagtatcgtcgagagctccagaccggag
acgagcgttcagagaaactccaccttcagggtcggcggtgaccccgagcaacgtgacgga
gagggagccgagagcttgtcggggaacgcgttgacgtctcaggctgcagaacacgaggag
aacacaaggagagaggcggtgggcggagaggagaatacaagggtccaggtggaccaatca
gagctcacggatccactggctgcagactgcacggcagatggcgagcagaagaatgtgatc
ggttacttcttcaaggacgaggagaaggcagaggagaaagcagaggatgaaatggcgaag
cgccgcaacgccttcctcctcaagcagcagcgcaaagcggaagaggcgagactacgcaag
cagcatcaagaggtggagagtgaggtgaaacgtgatgaggccaggcgcaaggcggaagag
gaccgcgttcacaaagaggaggagaaggcgcgacgagagataatcaagcaggaatacctg
cagaggaagcaggaagcgctgatggaggagcaaggcctcgttaagccacgcccacacacc
aaatccagcaggagcagacccaaatcactccaccgggccgagtccagcagcctctccaaa
ggatccaccacacgtaattctctgaagaagtccctgttgatcaaagcccagggctcagca
gccggctgcagggcagccgacctgagccgcagttatcgagggtcgacgctctctttggcg
accgaggcggacagcgtcatctccggaggggaggagtctcagagtgccggatccgtgtgc
tccgtggagtcgttcccggtgctgagcagggcgtcgagcaggaacctggagagggactgg
gagagcggctccatcgcctcttccatcacgtcaaccgagtacaacggtcctaaactcttc
aaggagccgagctccaagtccaacaagccaatcatcatcaacgccatcgcccactgctgt
ctggctggaagggttaatgagacccagaagaatgtgattctggaggagctggagaagtgc
gagtccaaccacctgatcatcctcttccgcgacggcggctgccagttccggggcatctac
tcgtactccccggacacggaggagatcgtcaagtacacggggacggggccgcgcgccatc
ggccgcaagatgatcgacaagctcttcaagtacagctcggaacgcaagcagttcaacgtg
gtgaccgccaagtcggtgtcggtcagcgtggacgccctgaccatccacaaccagctgtgg
cacgtcaagagacctggcagcgcacggaggaagtga
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