Pseudoliparis swirei (Mariana hadal snailfish): 130205131
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Entry
130205131 CDS
T09868
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03320
PPAR signaling pathway
pswi04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
130205131 (slc27a4)
09158 Development and regeneration
04382 Cornified envelope formation
130205131 (slc27a4)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pswi01004
]
130205131 (slc27a4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130205131 (slc27a4)
Lipid biosynthesis proteins [BR:
pswi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
130205131 (slc27a4)
Transporters [BR:
pswi02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
130205131 (slc27a4)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
130205131
NCBI-ProteinID:
XP_056288274
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Position
15:complement(11151648..11169087)
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AA seq
643 aa
AA seq
DB search
MMRLACATALLFVLRLLVGLPWYQVLPAILIFYLGSGGWSFLRIFAKTIGRDLHAAGVLL
QVKMNVRRHLKNKNTIPKIFAETVARYGDKTALIFEGTGEKWTFRQLDEYSNRVANLLLE
RGFKDGDVVALFMENRSQYVGLWLGMAKIGVEVALINFNLRLEALVHCVTISNAKAVVFG
SELNAAVSEVHSLMGKEVQMFCSGDWDPKQVPQGTECLEPLLDNAQTHLPSRPERCFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFKMTPDDVFYDCLPLYHSAGNIVGVGQ
CLLHGMTVVIRKKFSASRFWDDCAKYNCTIVQYIGEICRYLLNQPVREIEQQHRVRMALG
NGLRQSIWEEFMKRFNIPQVAEFYGATECNCSLGNFDNKIGACGFNSQILPFIYPIRLVK
VDEETMELIRGSDGVCIPCKPGEPGQLVGRIIQNDPLRRFDGYVNQSATSKKIANSVFKK
GDSAYLSGDVLIMDECGHMFFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGSEGKAGMAAIADPTQNTDLAKFVKDMDKALPPYARPVFLRFLPEVTKTGTFKFQKMD
LRQDSFDPSVVSDRLYFLDSRRGAYVQLDEELYRSILSGKHKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtctagcgtgtgccacagccctgctgttcgtgctgaggctgctggtgggcttg
ccttggtaccaggttctcccggccatcctgatcttctacctgggaagtggaggatggagc
ttcctgcggatctttgccaaaaccattggcagagacttacatgcggcaggtgtgctattg
caggtgaagatgaatgtcagacgccacctcaaaaacaagaacaccattcccaagatcttt
gccgaaacggtggctcgctacggggacaaaactgctctgatcttcgaggggactggggag
aagtggaccttccgacagttggatgagtactccaacagagtggccaacctgctgctggaa
aggggtttcaaggatggtgacgtggtggctcttttcatggagaacagatcccagtatgtg
ggcctctggcttggcatggccaaaattggagtggaggtagcacttatcaacttcaatttg
agactagaggccttagtccactgtgtcaccatctccaatgccaaggctgtggtgtttggc
tcagagctgaatgcagcggtgtccgaggtccacagtttaatggggaaagaagtgcagatg
ttctgttcgggagactgggaccccaaacaagtcccacagggaaccgagtgcctggagccc
ctgctggataatgcccagactcacctgccaagccggccggaacgctgcttcacagatcgc
ctgttctacatctacacgtcaggaaccactgggatgcctaaagctgctattgttgtgcac
agcaggtactaccgcatggcagccttggtgtattatggcttcaagatgactcccgatgac
gtgttttatgattgccttccgctctaccactctgcaggtaacattgtgggagtgggccag
tgcttattacatggcatgactgtagtcatcagaaagaagttctctgcctcgcgtttctgg
gacgactgtgccaaatacaactgcactattgtgcagtacattggtgagatctgccgatac
ctgctgaaccaaccggttcgggagattgagcagcaacatcgggtgcgcatggcactgggc
aacggcctgcgccagtccatatgggaggagttcatgaagcgcttcaacatcccacaggtc
gcagagttctacggagcaacagagtgcaactgcagcctgggcaactttgataacaagatt
ggagcgtgtggcttcaacagtcagatcctccccttcatctacccaatcagactggtgaag
gttgatgaggagaccatggagctcattaggggatctgatggcgtctgtattccctgtaaa
cctggtgaacctgggcagctcgtcggcaggatcattcagaatgatcctcttcggaggttc
gatggctatgtcaaccaatcagcaaccagcaagaagatagccaatagtgtcttcaagaag
ggagacagtgcttatctctccggtgatgtgttgatcatggatgagtgcggccacatgttc
ttcaaggaccgtacaggagacactttccgctggaaaggagagaacgtctcaacgaccgag
gtggagggaactctcagccggctgttggacatgaaagatgtcgttgtctatggagtggaa
gtaccaggatcagagggaaaggccggcatggccgccatcgctgatccgactcagaacact
gacctggcgaagtttgtgaaggacatggacaaagctcttcctccctacgccagacctgta
ttccttcgtttccttccggaggtcaccaagacaggaacgttcaagtttcagaagatggac
ttgcgtcaggacagctttgacccgagcgtggtgtcggacagactttacttcctggattcc
agaagaggggcttacgtgcagttggacgaggagctttaccgctccatactgtcaggaaaa
cacaaattgtga
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