Pseudoliparis swirei (Mariana hadal snailfish): 130205180
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Entry
130205180 CDS
T09868
Symbol
hpse
Name
(RefSeq) heparanase
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00531
Glycosaminoglycan degradation
pswi01100
Metabolic pathways
Module
pswi_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
130205180 (hpse)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pswi00536
]
130205180 (hpse)
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
130205180 (hpse)
Glycosaminoglycan binding proteins [BR:
pswi00536
]
Heparan sulfate / Heparin
Enzymes
130205180 (hpse)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Cu2_monooxygen
Motif
Other DBs
NCBI-GeneID:
130205180
NCBI-ProteinID:
XP_056288349
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Position
15:21417721..21424335
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AA seq
522 aa
AA seq
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MESTRLVLVLALFWTRTTGDLDRNSSALKVDLSVAVRRVDRRFLSVTIDASLAAEERFMS
LLSSPKVRTLAKALSPSFLRFGGTRQDFMVFTPQGVRQDSEDPAGASCDGQQLPVWLEDQ
LKKDWTRQQLILMKEDLQGKYRRVQYTESTVDLLHSFSSCSGMDLVFGLNALLRTSNNTW
NSSNAAALLRYCESRRYHMAWELGNEPNSFEKKAGVRVDGEQLGRDFTLLRALMSRSPWQ
RHAGLYGPDIGQPRDHRAHLLEGFLRTGSEAVDACTWHHYYVNGRDTSLEDFLDPEILDS
LIIKTKEVLEKVALVSPQKPVWLGETSSAFGGGAAGLSDTFAAGFMWLDKLGLAALLGLD
VVMRQVFIGSGTYHLLDQDLDPLPDYWLSLLYKRLVGQEVLRVEAPGRRRVRLYLHCSSR
DRYPGGAVTLMTINLGHPAARLRLPARLAGPVEAFMLQAEQPGEEGLTSRSVRLNGQVMK
MRDDGTLPDMRAARLPPSEVLQLPAFSLSFFIFTEARAEACG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggagtccacgaggctggttctggttctggctctcttctggacccggaccaccggggac
ctggaccggaactcctcggccctgaaggtggacctgtcggtggcggtccgccgggtggac
cgacgcttcctgtccgtcaccatcgacgcgagcctggcggccgaggagcggttcatgtcc
ctgttgagctctccgaaggtccggacgctggcgaaggccttgagtccgtctttcctgaga
tttggggggacgagacaagacttcatggtcttcaccccccagggggtccgccaggactcc
gaggatcctgcaggtgcgtcctgtgacgggcagcagctgccggtctggctggaggaccag
ctgaagaaggactggacccggcagcagctgatcctgatgaaagaagacctgcaggggaag
tacagaagagtccagtacacagagtccaccgtggacctgctgcactccttctccagctgc
tcggggatggacctggtcttcgggctgaacgctctgctcagaaccagcaacaacacctgg
aacagcagcaacgccgccgcactgctgcggtactgtgagtccagacggtaccacatggcc
tgggagctgggcaacgaaccaaacagcttcgagaagaaggccggggtccgagtggacggg
gagcagctggggcgcgacttcaccctcctccgggcgctgatgtcacggtcaccatggcaa
cgccacgccgggctgtacgggccggacatcggccagccccgagaccaccgggcccacctg
ctggagggcttcctccggactggatctgaggctgtggacgcctgcacctggcaccattac
tacgtgaatgggagggatacgtctctggaggacttcctggatccagagattctggattct
ctgattatcaagaccaaagaagtcctggagaaggtggcgctggtctctcctcagaagccg
gtgtggctcggtgagacgagctctgcgttcggaggaggagccgctgggctgtcggacacg
ttcgccgcaggattcatgtggctggataagctgggcctagcggccctcctgggtctggac
gtggtgatgcgccaggtgttcatcggctctgggacttatcacctgctggaccaagacctg
gacccccttcctgactactggctgtcgctgctctacaagcggctggtgggccaggaggtg
ctgcgggtggaggcccctgggaggaggcgcgtgcgtctgtacctgcactgctccagcaga
gacaggtacccgggcggcgccgtcacgctgatgaccatcaacctggggcacccggcggcc
cgactccgcctcccggcccggctggccggcccggtggaggccttcatgctgcaggcggag
cagccgggggaggaggggctgacctccaggtctgtgaggttgaacggccaggtgatgaag
atgagggatgacgggactcttcccgacatgagagcagctcgtcttcctccctctgaagtc
ctgcagctgccggccttctccctcagcttcttcatcttcactgaggcccgggctgaagcc
tgcgggtga
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