KEGG   Pseudoliparis swirei (Mariana hadal snailfish): 130205202
Entry
130205202         CDS       T09868                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
pswi  Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:pswi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pswi03400]
    130205202 (helq)
Enzymes [BR:pswi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     130205202 (helq)
DNA repair and recombination proteins [BR:pswi03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    130205202 (helq)
SSDB
Motif
Pfam: POLQ_helical DEAD HTH_61 Helicase_C ResIII HHH_5
Other DBs
NCBI-GeneID: 130205202
NCBI-ProteinID: XP_056288389
LinkDB
Position
15:21402196..21414067
AA seq 995 aa
MKAAGEQDVQIKRVSSRKRSRDSQKTLLTPTGKRGGANGTRRPSRVMSDGPAAQYCSDSE
DLFGDYDSLLEDSSLLAGLDEAEQTAQKDFTALRRRQPPEDVLTDSILDLLGDEPLEDLP
ASQRQLKELTDGAAESDRLQGGGKTSAPLRDPERSTEEGTRRPRRSVADQMKRTMLCNAA
APSSVSRSAALKEAVVSKEIGVAMRALEAVRPESPDLGPFFGLPTRVKELMFKLRGIKSL
YAWQETCLNLDCVQQRRNLIYSLPTSGGKTLVAEILVLRELLCRRKDCLFILPYISLVQE
KVRGLASLGLELDFMVEEYAGSKGRFPPVKRRNNKSVYIATIEKAHSLVNSLIETGRVDD
LGLVVVDELHMLGDGSRGAIIEMTLAKVLHTTKSTQIIGMSATLGNIKDLQAFLKADNYT
NDFRPVQLKEYVKLNDTIYEVDQTEEECFKFSRVLNFKYSSAMKKTDPDHIIALVTEVIP
AHSCLVFCPTKKNCENVVAMICKYLKKEFLLLREEERALLLRELKASGRGSVCPVLRRTV
PYGLAYHHSGLTAEERRLLEEAYSSGVLCLLTCTSTLAAGVNLPARRVILRSPFVAADFL
RRSQYKQMVGRAGRAGIDSTGESVLILQDKDRVLARTLLCAPMESCFSGLLLSNEKGLLS
LILSLVGLNISSSVDQLLDFLCGTLLFVQRGHLCADTSLTEAVRRCVDLLQSKDLLTGSG
AEQQLQVTKLGRATYKGSVDLAYSSVLYKDLSLGLEGLLLSSCLHLVYLVTPYNMVAQCK
PDWMVYFRQFMLLSAAEQKMSAAVGVPESFITRKAAGQTVRKTVNMQVVGRMYLALVLSS
LLKESSVWNVAERFQLSRGFLQSLLSCCSAFCSCVLHFTQELEEFWPFRALLVDLTRRLS
YCVAAELVPLMEVAGVLESRARQLYGAGFRTPAHLANADVDLLANAIGDLRGRAHQIRAS
ARMLLNEKAAALQEEVDELLMKPSDLPTAETQRLI
NT seq 2988 nt   +upstreamnt  +downstreamnt
atgaaagctgctggtgaacaagacgtccaaataaaaagagtgtcctcgaggaaacggtca
cgggacagccagaagactctgctgacgcctaccgggaaaaggggaggagccaatggcacc
aggaggcccagccgcgtcatgtccgatggacccgctgctcagtactgcagcgacagcgag
gacctgttcggggactacgacagcctcctggaggacagctctctgctggccgggctggac
gaggccgagcagacggcccagaaggacttcaccgctctgaggcgcagacagccgccggaa
gacgtcctcacggactccatcctggacctcctgggagacgaacccttggaggacttaccc
gccagccagcggcagctcaaagaactaacggacggagcggcagagagtgaccggctgcag
ggcggagggaagacctccgcccccctcagagaccctgagaggagtacggaggagggcacc
aggaggcccaggaggagcgtggcggaccagatgaagaggacgatgctctgcaacgcagct
gctccctccagcgtctcgcgcagcgccgcgctgaaggaagccgtggtctccaaggagatc
ggcgtcgccatgcgggccctggaggccgtgaggccggagagcccggacctcgggcctttc
tttgggctccccaccagagtgaaggagctgatgttcaaactgagaggaatcaagtcttta
tatgcctggcaggagacgtgtctgaacctggactgtgttcagcagaggaggaacctgatc
tactctcttcccaccagcggagggaaaactctggttgcagagatcctggtcctccgagag
ctgctgtgcaggaggaaagactgcctgttcatcctcccgtacatatcgctggtgcaggag
aaggtgcgtggcctagcgagcttgggcctggagctggacttcatggtggaggagtacgct
ggcagtaaaggaagatttcctcccgtgaagagaagaaacaataaatcggtgtacatcgcc
acgatagagaaagcccacagcctcgtcaactccctgatcgagaccggcagggtggacgac
ctgggtctggtggtggtggatgagcttcacatgctgggtgacggcagcagaggagccatc
attgagatgacgctggccaaagtcctccacacgaccaaaagtactcagattatcggaatg
agcgccactctgggaaacatcaaggacctgcaggcctttttgaaggcggacaattacacc
aatgacttcaggcctgtgcagctaaaggagtatgtcaaactgaacgacaccatctatgaa
gtcgaccaaacggaagaggagtgttttaaattctcacgtgttctcaactttaagtactcc
agcgccatgaagaagacggatccggaccacatcatcgctctggtgaccgaggtcatccca
gcacattcctgtctggtcttctgtcccaccaagaagaactgtgagaacgttgtggccatg
atctgcaagtacctgaagaaggagttcctgctgctccgtgaggaggagcgggcgctgctc
ctcagggagctgaaggccagtgggaggggctccgtgtgcccggtgctgcgccgcacggtg
ccctacggcctggcctaccaccacagtgggctcaccgcggaggagcgccggctgctggag
gaggcctactcctccggggtgctctgcctcctcacctgcacctccacgctggcagccggg
gtcaacctacctgcacgcagagtgatcctgcgctcgcccttcgtggccgctgacttcctg
aggaggagccagtacaaacagatggtgggccgagccggtcgggccggcatcgactccacg
ggggagagcgtcctcatcctgcaggacaaggacagggtgctggccaggaccctgctgtgt
gcccccatggagagctgcttcagcggcctgctgctgtccaatgagaaaggcctcctgagt
ctcatcctgtcgctggttggcttgaacatctcctcgtcggtggaccagctgctggacttc
ctgtgcggcacgctgctgttcgtccagcgggggcatctgtgtgccgacaccagtctgacg
gaggcggtgcggcgctgcgtggacctcctgcagagcaaagacctcctcacggggtcgggg
gcggagcaacagctgcaggtcaccaagctgggcagggccacctataaaggctccgtggac
ctggcctacagcagtgtgctctacaaggacctgtctctgggcctggagggcctgctgctc
agcagctgcctccacctggtctacctggtcaccccgtacaacatggtcgctcagtgcaag
ccggactggatggtgtacttcagacagtttatgctgctgtcggctgcagagcagaagatg
tctgcagccgtcggcgtgccggagagcttcatcaccaggaaagctgcaggacagacagtg
aggaagactgtcaacatgcaggtggtgggccgcatgtacctggccctggtgctgtcctcc
ctgctgaaggagagcagcgtatggaacgtggccgagcgcttccagctgagtcgaggcttc
ctccagagtctgctgagctgctgctccgccttctgctcctgtgtgctgcacttcacacag
gagctggaggagttctggcccttccgggctctgctggtggatctgacccggaggctgagc
tactgtgtggcggcggagctcgtccctctgatggaggtggctggggtcctggagtccagg
gcccggcagctctacggggccggcttcaggactccggcccacctggccaacgctgacgtg
gacctgctggccaacgccatcggagacctgagggggcgggcccaccagatcagggcctcg
gctcggatgctgctgaatgaaaaggctgcagctctccaggaggaagtggacgagctgctg
atgaagccttcagatctgcctacagctgaaacacaacgactcatctga

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