Pseudoliparis swirei (Mariana hadal snailfish): 130205238
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Entry
130205238 CDS
T09868
Symbol
gpc6b
Name
(RefSeq) glypican-6b
KO
K08112
glypican 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pswi00535
]
130205238 (gpc6b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
130205238 (gpc6b)
Proteoglycans [BR:
pswi00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
130205238 (gpc6b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pswi00537
]
Others
130205238 (gpc6b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Serglycin
Motif
Other DBs
NCBI-GeneID:
130205238
NCBI-ProteinID:
XP_056288447
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Position
2:complement(7502941..7577051)
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AA seq
553 aa
AA seq
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MLTLETIICTFSVLSVAARADFKARNCSEVREACIGKGFSFAHVPLQKIPGEHLRVCPQG
STCCTQEMEDTFGQQSKQDFENLIDEISHELRSTYVARHQRFDEFFLELLENTERSLNEM
FVRTYGKPYMQNSEVFENLFAELKRYYTGGNVNLEEMLNDFWSRLLERMFTLLNSQYVIT
EDYLECISKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLSVGREVAQRVSKVSSTPA
CIRALTKMLYCPFCQGTPALKPCKNYCLNVVKGCLANQADLDPEWNLYIEALLLVAQRLE
GPFNIESVMEPIDVKISEAIMNMQDNSAQVSYKVFQGCGQPKPVGMTRSARGVPDVFNAR
FRPYSSEERPTAATRTSLDRLVVDIKEKLKLSKKFWSNLPEALCVEDRVTAGNASDDECW
NGHTKGRYFPEVQKDGLTHQVNNPEVVVDITRPDTLIRQQIMALRVMTNKLKNAYNGNDI
YFQDSSDEGSGSGSGSGCTEVCPTDVDVAAAEAPVVEADRSGPVDDAAPLSAASLSLPTM
LALSALALHRQWR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgctcacactagagaccatcatttgcactttttccgtgctgtctgttgcagcacgagca
gatttcaaggctcggaactgcagcgaggtgagggaggcttgtatcgggaaaggcttcagc
ttcgcacatgttcctctccagaagatcccaggtgaacatctccgtgtatgtcctcaggga
agcacatgctgcacccaggaaatggaggacacatttggtcaacaaagcaaacaggacttt
gagaatctaattgatgaaattagtcatgaattgagaagcacttatgttgccaggcatcaa
cgatttgatgaattcttcctggagctactggagaacaccgagaggtccctgaatgagatg
ttcgtgaggacttacggcaagccttacatgcagaactccgaggtctttgagaacctgttt
gcagagctgaagcgctactacacgggaggaaatgttaacctggaggaaatgctaaatgac
ttttggtcgcggctactggagcgtatgttcacgctgctcaactcccagtacgtcatcact
gaggactatctggagtgtatcagtaagtacactgaccagctcaagccctttggagacgtg
cccaggaagctcaaggctcaggttacccgggcattcatcgctgcacgcacatttgtccaa
gggctgtctgttggccgggaggtggcccagagagtgtctaaggtcagcagcacgccagcg
tgtattcgggcactgaccaagatgctgtactgccccttttgtcagggcacgccggcactg
aaaccctgtaagaactactgcctgaacgtcgtgaagggctgcctggccaatcaagctgat
ctggatccagagtggaacctgtacattgaggctttgctgctggtggcacagaggctggag
ggacccttcaacattgaatctgtcatggagcccattgatgtcaagatttccgaggccatc
atgaatatgcaagataacagtgcccaggtctcctacaaggtctttcaaggctgcggccag
ccaaaacccgtaggaatgacgaggtcggctcgtggtgttccggatgtgttcaacgctcgc
ttcaggccctacagctctgaggagcggcctaccgctgcaactcgtacaagcctagacaga
ctggtggttgacataaaagagaaactgaagctgtcaaagaaattttggtccaacctgcct
gaggccctgtgtgtggaggacagagtgaccgctggaaatgccagtgatgacgagtgctgg
aatggacacaccaagggcaggtacttccctgaagttcaaaaggatggactgacccaccag
gtgaataatcctgaggtggtcgtggacatcacccgcccggacacactcatccgccagcag
atcatggctctgagggtgatgaccaacaagttgaaaaacgcctacaacggcaatgatatc
tactttcaagactcaagtgatgaaggtagcggctcgggcagcggcagcggctgcacagag
gtctgcccgacagacgtggacgttgccgccgccgaggccccggtggtggaagccgaccgg
agcgggcctgtggacgacgccgccccgctctctgcagcctctctatccctgccaaccatg
ttggccctctcagccctggccctccaccgacaatggagataa
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