Pseudoliparis swirei (Mariana hadal snailfish): 130205239
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Entry
130205239 CDS
T09868
Name
(RefSeq) PH and SEC7 domain-containing protein 4
KO
K12494
PH and SEC7 domain-containing protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130205239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205239
Membrane trafficking [BR:
pswi04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
130205239
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
PH_9
PH
Motif
Other DBs
NCBI-GeneID:
130205239
NCBI-ProteinID:
XP_056288448
LinkDB
All DBs
Position
15:complement(14111446..14122452)
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AA seq
1090 aa
AA seq
DB search
MLMEEENVCSTQPDVTDSVLQQPQQDSWTSMDHQYVNGEEETIAWGDTEVQMNRAHGTDQ
LGLFLEAGRESPEEAEQWEQIVWPAHPVTCAGAPLSFATVQWDMPDPSAATPSFRADGGV
ANEPSSGGSESLGTASPSLHQSQRVNADLFIRQGRVDRDEVDSRFLNFHRERTGNGSEPC
DAADVQEPPTQEREDSTHELLGSNNGIPLRADSKEQEEGCSGTSYPVETVVLINILEGND
ISEVEVDSCVDSKLEEEQVEPGVLLTGQGDSSANGVEDEEEGEEDEEKQINESCTEESED
AKDVRCLSNVEFPAEQTDGTGPTVSPDELIDRKHSELLEERQHSGPEEAIALLQRFHEDP
NGQTAEPDMSEDVDHEQSDAADDHEEPWIKAADNTERIENSPEIIELTEEPKETSRLEER
HCGRVDLSLQPQRAESERLEMTGESKQIQAEVSRDSDRRGKSQRPKQPPEMELPEESTRR
EAAALPEDSTQSELTASAGVAERREQTEPSEQNEQMPQTSDSSQPALSGQLAQPETDESE
ATEHLSPEPEVTRQTARAEFNQVDKQAETSHRGEEAGDAEDGSVRTTVANEERPESPETA
APQMNGDAVTREMARRLAERLYGLDGIQRADVVKHLDKDNDFSRAVGEEYLKLFDFTGET
LDFAVRSFLKVVVLIGETQERERVLQHFACRFHQCNPDSFTSSESVLALTCSLMLLNTDL
HGQNVGKSMSSTKFVSNLDGMNEGENFSKDLLKSLYNSIKSEPLQWAIDEEELKSSVLVD
EDAAGDAPLRSKANPFQDIPHDKTASVAKQGFLQRKLHADIDGKRTPWGKRGWKTFYGVV
RGMVLYLQKDDYRRDQPLDEEVVSLHHSLAEQAAEYTKKPHVLRLQTADWRVLLFQASSK
MEMHSWISRINLVSALHSSPPFPAAVGSQRRFCRPILPSAQSAQTLERQLQSYAGTLQSF
KDDLLYLQQNMPEGKRAKAKELEEHRVKAEYLQHEMCRYELYIQGLEAWRSVKTTGGSAL
SVADLKQFDKAVCGDSVGEGDEVAGGLKKSHSSPSLELEMVVPTVIKVKRNISERRTYRR
TVIPRWNKEV
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggaggaggaaaacgtgtgctccacccaaccagatgtcacagattcagtcctc
cagcagcctcaacaagactcatggacgtccatggaccaccagtacgtgaatggagaggag
gagaccatcgcgtggggcgacacagaggttcagatgaaccgggcacacgggacggatcaa
ctcggtctgttcctcgaggcaggccgagagagccccgaggaggcggaacagtgggagcag
atcgtgtggccggcgcaccccgtgacctgtgccggcgcgccgctttccttcgccaccgtg
cagtgggacatgcccgatccctcggcagcgacaccttcattcagggctgacggcggcgtg
gccaatgagccgagctccggcggctcagagagtctcggcaccgcttccccctcacttcac
cagtctcaacgcgtcaatgctgatcttttcatacggcagggcagagtggacagagatgag
gttgattctcggtttctcaacttccatcgagagcggacaggaaacggctcagagccatgt
gacgctgcagatgtgcaagagccgccgacacaggaaagagaagattcaacacacgagctg
ttgggaagtaataacggcatcccactgagggccgactcaaaagaacaagaggagggatgc
tcgggaacctcatatcctgttgaaactgtggtcttaatcaacattcttgaagggaatgac
atctcagaagttgaagtggacagttgtgtcgattcgaagctagaagaggaacaagtggaa
cccggcgttctgctgactggacagggagactcttcagcgaacggtgttgaggacgaggaa
gaaggcgaggaagacgaagagaagcagataaacgagtcctgtactgaagaaagtgaagat
gcaaaagatgtccgttgtctgagtaatgtggagtttcctgctgagcaaactgatggtact
ggaccgactgtaagcccagacgagctgattgatcggaagcactcagagctcctggaggaa
aggcaacactcagggcctgaagaggccatcgcgctactccaacggttccatgaagatccc
aacggtcagactgcagagccagatatgtctgaagatgtagaccatgaacagtcggatgct
gcggacgaccacgaagaaccgtggattaaggcggcagacaacacagagaggatagaaaac
tcaccagagataatcgagctgacggaagaaccgaaggagacgagtcgtttagaggaacga
cattgcggccgggtcgatctttccctgcagcctcaacgagccgagtccgagcggctcgag
atgaccggcgagtcaaagcagatccaagcggaggtgtcgcgggactccgaccggcgaggg
aagtcccagcgcccgaaacagccaccggagatggaactgccggaggagtccacccgacgt
gaggcggccgccctgccggaggactccactcagtcagagctgacagcttctgccggagtg
gcggagcggcgagaacagacggagccgtcggagcagaatgagcagatgccgcaaacgagc
gactcgtctcagccggcgctctctgggcagcttgcgcagccggagacggatgagtccgaa
gcaacggagcatctgtctcccgagcccgaggtcacgcggcagacagcgcgggccgagttc
aaccaggtggacaaacaggctgagacgtcccatcggggcgaagaagcgggagatgctgag
gacggctccgtgcgaacaaccgtcgcaaatgaagagcgacccgaatcccccgagacggca
gcgcctcagatgaacggagacgcggtgaccagagagatggcccggcgcctcgcggaacgg
ctgtacgggttggacggcatccaacgcgcggacgtggtgaagcacttagacaaagataac
gacttcagtcgagctgtcggggaggaatacctgaaactatttgacttcaccggggaaacg
ctggattttgccgtgaggtctttcctgaaagtggtggtactgatcggagaaacccaggag
agggagcgtgtgctgcagcatttcgcctgccgcttccatcagtgcaaccccgactccttt
acctcttcagagtcggtgttggcactcacatgttccctgatgcttctcaacactgacctg
catggacagaacgtagggaaatcaatgtcctcgactaaatttgtgtccaacctcgatggg
atgaatgaaggagaaaacttcagcaaggatctcttgaagagtctctacaactctataaag
agtgagccgctgcagtgggcgattgacgaggaggagctgaagagctctgtgttggtggac
gaggacgcagcaggagatgcgccgctgcgctcgaaggcgaaccccttccaggacattcct
catgacaaaacggcttctgtggccaagcaggggttcctccagaggaagctgcacgccgac
atcgacggcaagcgcactccgtggggaaagagaggctggaagactttctatggagtggtg
aggggaatggtcctttacctgcagaaggatgattacaggagggatcagccgcttgacgag
gaagtggtgagtttgcatcactctctggccgagcaggcggccgaatacaccaagaagcca
cacgtcctccgtctgcagacggctgactggagggttttactctttcaggcctcatccaaa
atggagatgcactcatggatcagccgcatcaacctggtctcggctcttcactcctcgcct
ccgttccccgccgccgtcggctctcagaggagattctgcagacccatcctcccctcagcg
cagtcggctcaaactctggagcgtcagctgcagtcgtatgcaggaacactgcagtccttc
aaagacgacttattgtacctgcagcaaaacatgcccgagggcaaaagagccaaagccaag
gagctggaggagcatcgcgtcaaagcggagtacctgcagcacgagatgtgtcgctatgag
ctctacatccagggcctggaggcctggaggagcgtgaagacgacaggcggcagcgcgttg
agcgtcgcggacctgaaacagtttgataaagcagtgtgtggcgactctgtgggggaggga
gacgaggtcgctggcggactgaagaagtcccactccagcccctctctggagctggagatg
gtcgttcccacggtgatcaaagtcaaacgcaacatctcagagagacggacttatcgcagg
accgtcattcctcggtggaataaagaggtttaa
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