Pseudoliparis swirei (Mariana hadal snailfish): 130205242
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Entry
130205242 CDS
T09868
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X1
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pswi03041
]
130205242 (srek1)
Spliceosome [BR:
pswi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
130205242 (srek1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nucleo_P87
RBD_DEAH11
RRM_3
Motif
Other DBs
NCBI-GeneID:
130205242
NCBI-ProteinID:
XP_056288450
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Position
15:18706267..18716228
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AA seq
476 aa
AA seq
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MNGILGTAVVQVTNLSASVSSEQMRTLFGFLGDIEELRLYPPDNGPVSFSSKVCYIKYRD
PSSVGVAQHLTNTVFVDRALIVVPCAEGRIPEEGKAMSLLAPAAPPVPSLVPGDGLLPIP
TPAPLQNLNLPVVNRVQAAVEPAASSSSSASAQQPLMGNVDPSKVDEIRRTVYVGNLNSQ
TTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFVEQESVGRALTFNGVMFGDRPLK
VNHSNNAIVKPPEMTAQAAAKELETVMKRVREAQCTIAAAIDPADLKKSSPSRSRRSHRS
PSPSRSRSTTQRKRSPSKPRCPTNTPSLPAPKVSPKTDAHNPRSAHKRRSRSRDKRPSRS
RSRGHKRSKERSKSPRRKARSPSPKRGRKDKRKERSRDRKDRSTSRKRSRKDEDRIKAKA
KPRKAERGGSGRAAKEDGGSEDALSEDTTSSPRRRHNGSCKTRNAERAPTGAARSK
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggattctaggaaccgctgtcgtccaggttaccaatctgtccgcgtccgtgagc
agcgagcagatgcggactctgttcggtttcctcggagacatcgaggagctgcggctctac
ccgcccgacaatggccctgtgtctttctcctccaaagtgtgctatataaagtatcgagac
ccctccagtgttggtgtggcgcaacatctcacaaacactgtttttgttgacagagctctg
atcgtggtgccatgtgcggaagggagaatcccagaagagggcaaggccatgtcacttttg
gcccctgcagccccgccggtacccagtctggttcctggagacggactgctaccaattccc
actccagctccgcttcagaacctgaaccttcccgtcgtgaatcgtgtgcaagctgccgtg
gaacccgcagcatcgtcgtcgtcatcggcgagcgcccagcaacccctcatgggaaatgtg
gatccctcaaaagtggacgagatcaggaggaccgtctacgttggcaacttgaactcacag
accaccactgcagaccagctgctggagttcttcaagcaggtgggcgaggtcaagtttgtg
cgaatggccggagacgagactcagccgacacgcttcgccttcgtggagttcgtggagcag
gagtccgtcggcagagccctgaccttcaacggagtcatgttcggggaccgacccctgaag
gttaatcactccaacaacgccatcgtgaaaccccccgagatgacagcacaggccgccgcg
aaggagctggagactgtgatgaagagggtgcgggaggcccagtgtaccatcgccgccgcc
atcgatccagccgacctgaagaagagctcccccagccggtcgaggaggtcgcaccgctcc
ccctcgccgtcgcgctcccgctccacaacgcagaggaagcggtccccgtcgaaaccgagg
tgcccgacgaacacgccgagcttaccggcgccgaaggtgagcccgaagaccgacgcccac
aatccccggagcgcccacaagcggcgctctcgctcccgagacaagagaccaagtcggagt
cgctccaggggccacaagaggagtaaggagcggtccaagagccctcggaggaaagccaga
tcgccctcaccaaaaagaggcaggaaagacaagaggaaggagcgcagccgggaccgaaag
gaccgctccacatccaggaagaggagccgcaaggacgaggaccggataaaggctaaggcc
aagccgaggaaggcggagagggggggctccggccgagcggcaaaggaagacggcggcagc
gaggacgcgctcagcgaggacacgacgtcgtcgccgcgccgacggcacaacggcagctgc
aagactcgcaatgctgagcgcgcgcccacgggcgccgcccgctccaagtga
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