Pseudoliparis swirei (Mariana hadal snailfish): 130205255
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Entry
130205255 CDS
T09868
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130205255 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205255 (ap3b1a)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
AP-3 complex
130205255 (ap3b1a)
Endosome - Golgi transport
130205255 (ap3b1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
Motif
Other DBs
NCBI-GeneID:
130205255
NCBI-ProteinID:
XP_056288472
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All DBs
Position
15:19258503..19310786
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AA seq
1115 aa
AA seq
DB search
MDVGFSMRSEAAGAMRTALISAENLQLTLKTGLSQEEQALTHTGRSPTETHKAGNEDLKE
MLESNKESLKLEAMKRVVGLIAKGKNASELFPAVVKNVASKNIELKKLVYVYLVRYAEEQ
QDLALLSISTFQRALKEPNQFIRASALRVLSSIRVSIIVPVMMLAIKEAAADMSPYVRKT
AAHAIQKLYSLDPDQKEQLIEVIEKLLKDKSTLVAGSVVVAFEEVCPDRIDLIHKNYRKL
CNLLVDVEEWGQVVIISMLTRYARTQFTSPWKEGAMFDEDNETAFYESNSEEKKDQTEAT
AYVMDPDHRLLLRNTKPLLQSRNTAVVMSVAQLYWHVAPKHEVNIVTKSLIRLLRSHREV
QYIVLQNIATMSIQRKGMFEPFLKSFYVRSTDATHIKTLKLEILTNLANEANISTILREF
QTYVKSQDKAFAAATIQAIGRCATDISEVTDTCLSGLVLLLSNRDETVVAESVVVIKKLL
QTRPTQHSDIIRHMAKIFDNISVSMARASILWLMGEYCERVPKIAPDVLRKMAKTFTAEE
DIVKLQTVNLAAKLYLTNSKQTKLLTQYILNLGKYDQSYDIRDRTRFIRQLIVPNEKSGA
LNKYARRILLAPKPAPMLESAFKDRDRFQLGTLSHSINSKATGYQELSDWPAVAPDQSVR
NVEVIEPVQESAPLVGKTKKPKSDAKFYSDDEEEKEEKASESGSSDSSSSEESGSESEEQ
SSEESSETSSDSGKSSSGSEKSSSESESEQKKKMKKKTKKAPQKKSKTTAAASSDSDENG
NGPVAQDSSSSAQSSSSSETDSEDDSEDDSNSDAPPAQQKKKSDVKAKTKVEEKSKTEVS
LLDLDDFCPAPANAPKPAVISPSLLSDLEGLSLSNVSSAMQVTTPSFGPVKTHELLHHMT
GKGLSAKYHFPRQPCLYQPRMVAVQVILANSSDHSLEKIHIGDRSPAGLSIHCFNTIERL
EPEASVTVSMGIDFSDSTQAANFQLCTKEDQFSVSIQPGVGELLMPSTMTEQDFSKEQGK
LLGMNETSATVTMATANTSSQAISKQVLSVANVGVVSSSPNDLHRFAGRTVSSGALVLVS
LELKEPSAALLTINTEKSVMASMLLRDLKQALALA
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atggatgttggtttctcgatgcgctcggaggcagcgggagccatgaggacggcgctgatc
tccgccgagaacttacagctcactctgaagaccggcctcagtcaggaggagcaggccctc
acacacaccggcaggagccccacggagacgcacaaagccgggaatgaagaccttaaagag
atgttggagagcaacaaggagtcgctcaaactggaggccatgaagcgggtggttgggctg
attgccaaagggaaaaatgcatccgagctgtttcccgctgttgtgaagaacgtggccagt
aaaaacatcgagctcaagaagctggtgtatgtgtacctggtgaggtacgcagaagagcag
caggacctggcgttgctgtccatcagcaccttccagcgggccctcaaggagccaaaccag
ttcatccgggccagcgcactgagggttctgtccagtatccgggtctccatcatcgtcccc
gtcatgatgctggccatcaaggaggcggcggccgacatgtccccgtatgtgaggaagacg
gcggcccacgccatccagaagctctacagcctggatccagaccagaaagagcagctgatc
gaagtgatcgagaaactcctgaaagacaaaagcaccctggtggccggcagcgtggtggtg
gcgttcgaggaggtgtgtccggatcgcatcgacctcatccacaagaactaccggaagctg
tgtaacctgctggtggacgtggaggagtggggccaggtggtcatcatctccatgctgacg
cgctacgccaggacgcagttcaccagcccctggaaggagggcgccatgttcgacgaggac
aacgagacggcgttctacgagtccaactccgaggagaagaaagaccagacggaggccacg
gcctacgtcatggatccagatcacagactgctgctcaggaacaccaaaccgctactgcag
agcaggaacacggctgtggtgatgtctgtcgctcagctctattggcatgtggctcctaag
catgaagtcaacatcgtcaccaagtcactgattcgactgctgagaagccacagagaggtg
cagtacattgtgcttcagaacatcgccaccatgtccatccagaggaaggggatgttcgag
cccttcttgaagagtttctacgtgagatctacagatgccacgcacatcaaaacgctgaag
ttggagatcctgaccaacctcgccaatgaagccaacatctcaactatcctgagggagttt
cagacctacgtgaagagccaggacaaggcgttcgcagcggccaccattcaagccatcggc
cgctgtgccaccgacatctccgaggtgacggacacgtgtctcagcggtctggtgctgcta
ctttccaaccgagacgagacggtggtggccgagagcgtggtggtgatcaagaagctgctc
cagactcggcccacccagcacagtgacatcatcagacacatggccaagatcttcgacaac
atctcggtctccatggcccgagccagcatcctgtggctgatgggagaatactgcgagcgg
gtgccaaaaattgcacctgacgtcctccgtaaaatggcgaagacgttcacggccgaggag
gacatcgtcaagctgcagacggtcaacctggcggccaaactctacctcaccaactccaag
cagacgaagctgctgacccagtacatcctgaacctcggcaaatacgaccagagctacgac
atcagagaccgaacccgcttcatcaggcagctcatcgtgcccaacgagaagagcggcgcc
ctcaacaagtacgcccgccgcatcctgctggcgcccaaaccggccccgatgctcgagtct
gccttcaaagatcgagaccgcttccaactgggcactctctcccacagcatcaacagtaaa
gccaccggctaccaggagctctcggactggccggcggtcgctccggaccagtctgtgagg
aacgtggaggtcattgagccagtgcaggagtcggctccgttggtcgggaagaccaagaaa
cccaaatctgatgccaagttctactcggacgacgaagaggagaaggaagagaaagcatct
gagagcggtagcagtgacagcagcagcagtgaagagtcgggcagtgagagcgaggagcag
agcagcgaagagtcgtccgagacctccagcgactccggaaagagttccagcggctcggag
aagagctccagtgaatccgaatccgaacagaagaagaagatgaagaaaaagaccaagaag
gcgccgcagaagaagagcaagacgactgctgctgcttccagcgactcggatgagaacggg
aacggaccggtggcccaggacagcagctcgtcggcccaaagctcctccagctccgagacc
gactccgaggacgactccgaggacgactccaattcagacgcccccccggcacagcagaag
aagaagagtgacgtgaaggccaaaaccaaggtggaagagaagtccaagacggaggtctcc
ttactggatctagatgacttttgtcccgcgcccgcaaacgcaccgaagcccgcggtcatc
tctccgtccctgctgtccgacctggagggcctctccctctccaacgtctcctccgccatg
caggtcaccactccatcttttggccctgtgaaaacccacgagctgcttcaccatatgact
ggaaaaggtctgtcggccaagtaccatttcccccggcagccctgtttgtaccagcccagg
atggtggctgtacaggtcatactggccaacagctcagaccacagcctggagaaaatccac
atcggagaccgaagccccgcgggcctgagcatccactgcttcaacaccatcgagcggctg
gagccagaggcctcggtgacggtttccatgggtattgacttcagcgactcgacacaagca
gccaacttccagttgtgcaccaaggaggaccagttcagtgtgtccatccagccgggggtg
ggcgagctgctgatgcccagcaccatgaccgagcaggacttcagcaaggagcaaggtaag
ctcctgggcatgaacgagacctcggcgaccgtcaccatggcaacagcaaacacctccagt
caggccatcagcaagcaggtcctgtcggtggccaacgtcggagtggtgtcgtccagcccc
aacgacctccacaggtttgctggccgaacagtcagcagcggagccctggtcctggtctcg
ctggagctgaaggagccctccgccgccctgctcaccatcaacacggagaagagcgtcatg
gcgtccatgttgctgcgagacctcaaacaagccctcgccctggcatag
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