Pseudoliparis swirei (Mariana hadal snailfish): 130205257
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Entry
130205257 CDS
T09868
Name
(RefSeq) nipped-B-like protein B
KO
K06672
cohesin loading factor subunit SCC2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130205257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130205257
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
130205257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
ALKBH8_N
Cnd3
Motif
Other DBs
NCBI-GeneID:
130205257
NCBI-ProteinID:
XP_056288475
LinkDB
All DBs
Position
15:complement(13550308..13571536)
Genome browser
AA seq
2727 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPILLQTLLSRNPKIFRDKSVMQQPMMQQ
YKMSQNQVHGSPGSNYQQTTVPQSPSGCFASPQSGSGARFLPPQNSPIPSPYTPQSPADY
MQYNPPSYSQHQQTQQVRNIHDDKVSAPLSSTASNHNVRLGSDEDYINMAQRLGNEENDP
SMRAATFPVKSPESVCSPAGSEESAKRSRPPLIVQSHPPDMPHAAAPDLPLTSADRKKKQ
KEKCKEENELTDKNASYGIVNSPPKESTRLTIKLSRVKLSEMDQSEELPLRPRVDSEEHE
TDLTNNNNNQLSRTAQDLSHKFGAKEQANCKQVPAQPNSKESGAVSGVVFDDAEIDTLAE
IERIERESASERERWSKEVQDKDKPLKKRKQDTYPQESGAESSDAPTLQGGNTDSKLKPK
KTNAASNGASRPALMVSIDLQQAGRMKGQPVVVLEAQTFCEDHLRHQKTKTDGKVDKVAE
SRPGIIKQHADNPRKSCSDGQPEGPKPKPESQRESKHKPDNKTVSGKRHSDDRRPDTVRQ
KHDKVSDLRHKEEKNHNIHRSHVSNPETPKTTIKGERNSRHGEGKTKDRDKDKVGDRDDK
DKDKAKDKDRDDKDKAKDKDRDDKDKDKAKDKDDRDKDKAKDKDRDDRDKDKAKDKAGDR
VKDKDRDKDRDRDKVGDRDDRDKDKEKEKARDRVKDKDRDNDRERDKVGDKDRDKNREKV
RDRDKDRDRDKDKDGEKNRARDKDRDRDRDRKHKTSRENCNKHSPDRPTKPDSPRVKQDD
GGKSTDLNGRQKTESSSLQNAQHKKDRKSGDGSSSCQAGNKQPSSETKRCEFPTYLLGGK
SGSLKNFVIPKLKRDVKDLQLPSKLIEGWSEPLVRLERLSLIKNLNQGAKPVVVLNKLNI
DEVKRIIKESRNTHGSRPRSVDKSGRENKRKHSMISKKSKYTELDEDEDEEDDDDDVHSD
IESPKKKSKKDHDKSWKHEEKRGSGQHRSRGSARGSRSCHRSPNSSDEDSPSPSLRDVAR
KMKKKEKQKNKKAYESKLTPEEKMDSSTFKRFTANMDSIIESLDDVDLTAADEDEIPEEL
LLGKHQLSELGNDSAKMKAMCIFNKCSTKKLVKILNILEKNIQDSVKLSTLMNHENDSMD
EERLWRDLIMERVAKSADACLTALHIMTSPHMPKAVYIEDVIERVLQYTKFHLQNSLYPQ
YDPVYRKGGMHTSKSKRAKISTHKQKVVVILYDKVCDILSNMSELLEIQLLTDTTILQVS
TLGITPFFVENVSELQLCAITLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRL
NNDSDKEPLYIQMVSALVLQLIQCVVRLPSERDAEGEHKKVDKDVFITNSYETAMRTAQN
FLTVFLKKCGSKQGEDDYRPLFENFVHDLLSTVNRPEWPASELLLSLLGRLLVHQFSNKQ
TEMALRVASLDYLGTVASRLRKDAVSSRMDQKAIDRILKESQGSDEVPKLQKALLDFLKE
NIETEPSLVFARKFYIAQWFRDTTTEAEKAVKSQNDDEDFKEVDSTEEIIQKAETRKKFL
RKIMKISTSDLNSLSVNADTIDYEDSCLIVRHLASMRPFAQSFDIYLSQILRVLGESAIA
VRTKAMKCLSEVVAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPQLIE
QYYDMLIERILDTGISVRKRVIKILRDICLEMPDFHKITEMCVRMIRRVNDEEGIKKLVN
ETFQKIWFTPTPGHDKNAMTRKILNITDVVLACKDSGYDWFEQLLQNLLKSEEQASYKPA
KKACVQLVDNLVEHILNSEESIADCEDKGVNPGRLVACITTLYLFSKIRAQLMVKHAMTM
QPYLTTKCNTQNDFMVICNVAKILELVVPLMELPSETFLTTLEEDLMKLIIKYGMTVVQH
CVSCLGAVVNKVTHNYKFVWTCFNRYYGALAKLKTQHQEDPNSSTLAANKTTLLRSLFTV
GALCRHFDFDQEEFKGTSKIVIKEKVLELLLYFTTHEDEEVQIKAITGLGFQFIMHPELM
FVQDVKVMYNNTMSDENSMVALKIQVLKNLQTYLQDEDSRMQEADRGWKNQSKREDLKEM
GDISSGMSSSIMQIYLKQVLECFFHSQSTVRHFGLSVIILTLSQGLIHPVQCVPYLIAMG
TDPEPTMKNKSDQQLVDIDKKYIGFIHMKAVAGLKMSYQVQQAINGSKGALIRGFRHDDS
DVSLCAHLYTLVRGNRQYRRAFLISLLNLFDDSSKTEVNRLLFIADNLAYFPYQTQEEPL
FIMHHVDITLSVSGSNLLQSFKESLQKGPIQKEKKTATKTKKKKKKHQRRKHSSDDDDDD
NDDDEEDDEQSSSTSSSSDEEDEVVQSQKKPVLSDSEAEMEDEDAVMDRLPENHGPLLDF
ASASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTEAPKVYDKTVNKKSKVHFNPRQTLDY
LKRDLANTDLSNEIKRRIVKQYLDFKVLMEHLDRDEEDDEGEASANARNKAITALLKVPK
SSNQNHSKVEAVPVETEEEESEDEDPPVPQRKPRKGGESAEDTGNLNERLKAMDIIAIWC
PKYKDRPQIARVIQRIKTGYSIHWMTGSYSAPWVEVKKREGRKKVPWVDTIKESDIIYKK
IPFTSGQKLSNKLAQTLRALYAAKDGE
NT seq
8184 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttctcctctccctgccaccaccgctaagagcctg
ctctacaatggaaggatctctgaagaggtcagcagcctgctggtgtgtcgggacgaaaat
ctggtgactcaactggcacatagccttaaccaagtctccactgaacacatagagttgaag
gacaacttggggaatgacgaacccgagggtgacatgccaatccttctacaaacgttgctg
tccaggaaccccaaaatcttcagggacaaaagtgtgatgcagcagcccatgatgcaacag
tataagatgtcccagaatcaggtgcatgggagtccaggatcaaactatcagcaaaccact
gtcccccaaagtccctctggatgctttgcatcaccacagtctggatcaggtgctcggttc
ttgcccccgcagaacagccctatacccagtccctatacccctcagagtcctgcagactac
atgcagtacaatccacccagttactctcaacaccaacagacacagcaagttcgaaatatc
catgacgacaaggtctctgctccgctatcaagtactgcatctaatcataatgtgagacta
ggctcagatgaagactacatcaacatggctcaaagactgggaaatgaggagaatgacccc
tccatgagggctgccacgtttccagttaaatcaccagagtctgtgtgttcccctgctggg
agtgaagagtctgcaaaaaggtccaggcctccccttatcgtgcagtcccatccacctgat
atgccacacgctgcagcacctgacttgccccttacctctgctgaccgcaaaaaaaagcag
aaagaaaagtgtaaagaagaaaatgagctgactgacaaaaatgcctcatatggcatcgtt
aattctccaccaaaagagtccaccaggctgactattaaactgtcccgagttaagctttca
gaaatggatcaatctgaagagcttcccctgaggccacgtgttgattcggaggaacatgaa
actgatttgacaaataataataataatcagttgtcaaggactgcccaggacctgtcacac
aagttcggtgccaaggagcaggcaaactgtaaacaggttcctgctcagccaaatagcaag
gagtccggagccgtcagtggggttgtgtttgatgacgctgaaatagacacgctggcagag
atcgagagaatagaacgcgagtcggccagtgagagggaaagatggtcgaaagaagtccag
gataaagataagccactgaagaaacggaagcaagacacctatcctcaggaatctggagcc
gagtcaagtgacgcgcctactttgcaaggcggcaacactgatagcaagttgaaacccaag
aagacgaatgctgcaagtaacggtgccagtcgacctgctttgatggtcagtattgatctg
cagcaagctggccgaatgaaaggacagcctgtcgtggtcttggaagcacagacgttctgt
gaggaccacttacggcaccaaaagacaaagactgatggaaaggtggataaagttgctgag
agcagaccggggatcatcaaacagcatgctgacaaccccaggaagtcgtgctcagacggg
caaccagaaggccccaagccgaagccagaaagtcaacgcgaatccaaacacaagcctgac
aacaaaactgtcagtggaaagagacactcggacgacaggcggccagacaccgtgcgacag
aaacatgacaaggtttcagacttgcgccacaaagaggaaaagaaccacaacattcacaga
tcccatgtcagcaacccggagactccaaaaaccacgatcaagggggagcgcaactccaga
cacggagaaggcaaaactaaggacagagataaagataaagttggagacagagatgataag
gataaggacaaagcaaaggataaagatagagatgataaggacaaagcaaaagataaagat
agagatgataaggataaggacaaagcaaaagataaagacgatagggataaggacaaagca
aaggataaagatagagatgatagggataaggacaaagcgaaggataaagctggagatagg
gtgaaggacaaagatcgagataaggacagagatagagacaaagttggtgatagagatgat
agggataaggacaaagagaaagagaaagctagagatagggttaaggacaaagaccgagat
aatgatagagaaagagacaaagttggagacaaagatagggataagaacagagaaaaagtt
agagatagggataaggacagagatagagataaggataaagatggagaaaagaacagagct
cgggataaggacagagatagagaccgagatcggaagcacaagacgtcgagggaaaactgc
aacaagcactctcctgacaggccgactaaacccgacagcccgagagtgaagcaagacgat
ggtggaaaatccactgaccttaatggtcgacagaagaccgagagttccagccttcaaaat
gcacaacataagaaagacaggaaaagtggggatggcagcagtagctgccaagctgggaac
aaacagccgtcttcagagacaaaacgttgcgagttccccacatacctgctgggtggcaag
tcgggaagtctaaagaactttgtgattcctaaattaaaacgggatgtgaaagatctccaa
cttccaagcaagctgattgagggctggagtgaacccctggtcaggctggagagattgtcc
ttgattaagaacctaaatcaaggagctaagccggttgttgtgctcaacaaactcaatatt
gatgaggtaaaaaggatcatcaaggaaagcaggaacacacacggctccagacccagatcc
gttgacaaatcagggagagagaacaagcgtaagcacagtatgatcagtaagaaatccaag
tacactgagctggatgaagacgaggacgaggaggacgatgatgatgatgttcactctgac
attgagtctccgaagaaaaagtccaagaaagaccacgacaagtcctggaagcatgaagag
aagaggggatctggacagcaccgcagcagaggttctgctcgggggtccagaagctgccac
cggagtccaaacagttcagacgaagactctccgtccccaagcttgcgtgatgttgccaga
aaaatgaagaaaaaggagaaacaaaaaaacaagaaagcgtatgaatccaagctgacacca
gaggaaaagatggactcctccacatttaagagattcacggctaacatggacagcattatc
gagagcctcgatgacgtggacctcactgccgcagatgaggacgagatacccgaggagctg
ttgcttggaaagcaccagttgagcgagctaggcaacgattctgctaagatgaaagctatg
tgcatctttaacaagtgttcaactaagaaactggtgaaaattttgaatatcctggagaag
aacattcaggacagcgtcaaactttccacactaatgaatcatgaaaatgattccatggat
gaggagcggttgtggcgtgaccttatcatggagcgggttgctaagtctgctgatgcctgt
ttgactgctctccacatcatgacgtctccacacatgcccaaggcagtttacatagaagat
gtaatcgagagggtgttgcagtacaccaagttccatctgcagaattctctgtaccctcag
tatgacccagtctacagaaaaggtggcatgcatacttcaaagtccaagcgagcaaagatt
tctactcataaacagaaggtggtcgtcatcctctacgacaaagtgtgtgatattctcagc
aatatgtcggagcttctggagatccagctgctaactgacaccactattctccaggtgtca
accctgggcatcacacccttttttgtggagaatgtcagtgaactgcagttatgtgccatc
acacttgtgacagcagtgttttctcgttacgagaagcacaggcagctcattctagaagag
atcttcacctctttagctagactgccgactagtaaacgcagcctcaggaactttagacta
aacaatgattcggataaagagcccttgtatatccagatggtctcagcactggttcttcag
ctcatccagtgtgtggtccggcttccctcagagagggatgcagaaggtgaacataagaag
gttgataaagatgtcttcatcacaaactcctatgaaactgccatgaggacagctcagaac
ttcctaactgtgtttcttaagaagtgtggtagtaagcagggagaggatgactacaggcct
ctgtttgagaactttgttcatgacctgctgtctacagtgaaccggcctgagtggcctgca
tctgaactgctgctcagtttactgggccggctgttggttcaccaattcagtaacaagcag
acagaaatggcgctgagggtggcgtcgctggattacctcggcacggtcgcttctagactg
cgtaaagatgctgtcagtagcaggatggaccaaaaggctatcgaccgcatccttaaagag
tctcaaggcagtgacgaggtcccgaaactccagaaggccctgctggacttcctaaaggag
aacattgagacagaaccttctctggtgtttgccaggaagttctatattgctcagtggttc
agggacactacaactgaggcagagaaagcggtgaagtctcaaaatgacgatgaggacttc
aaagaagttgactcaactgaggagattatacagaaggccgagacacgaaagaagttcctc
cgcaagatcatgaagatttcaacatcagatttgaattctttgagtgtaaatgctgacaca
atagactatgaggactcatgcctgattgtcagacatctggcctccatgaggccgtttgca
cagagctttgatatttacttatcgcagattctgagagtgctgggcgagagtgccatagca
gtcagaactaaagccatgaagtgtctgtctgaagtagtagctgtcgatccaagtattctt
gcaaggttggatatgcagcgtggggttcactgtcgcctcatggacaactccaccagtgtg
cgagaggcagccgtggagctcctcggccgctttgtgctaagtcgaccgcagctcattgag
cagtactatgacatgctcattgaaaggatattggacactggtataagtgtaaggaagagg
gtcataaagatcctgagggatatttgcctggagatgccggacttccataagatcaccgag
atgtgtgtcaggatgatccgaagggtcaacgatgaagaggggatcaagaaactggtgaat
gagacattccaaaagatctggttcactcccacacccggtcatgacaaaaatgccatgacc
cggaagatcttgaacatcacagatgtggtgttggcgtgtaaagattcaggctatgattgg
tttgagcagcttctccaaaatctcctgaagtcagaagagcaagcttcatacaaacctgcc
aagaaggcctgtgttcagttggtggacaatctcgtggagcacatactgaattccgaggag
tctattgcagactgtgaggacaaaggggtcaacccaggtcgtctggtagcatgcatcacc
actctttacctgttcagcaagatcagagcgcagttaatggtgaaacatgccatgactatg
cagccctacttaaccaccaagtgcaacactcagaatgacttcatggtgatatgtaacgtg
gcaaagatcttggagctggtggtgcctctgatggagctcccaagtgagactttcctcact
accttagaagaagacctgatgaagctcatcatcaaatacggcatgacggtcgtccagcac
tgtgtcagctgtctcggtgcagtcgtcaacaaggtcacacacaactacaagtttgtctgg
acttgtttcaatcgctactacggagctctggcaaaactgaagacacagcaccaggaggac
cccaacagctccactctggctgctaacaaaactactctactgcgctcactgttcactgtg
ggggcgctctgtcgacactttgattttgaccaagaggagttcaagggtactagcaagatt
gtcatcaaggaaaaagtgctggagcttctgttgtacttcaccactcatgaagacgaagag
gtccagatcaaggccatcacgggtcttggcttccagttcatcatgcatccagagctcatg
tttgtgcaggatgtgaaggttatgtacaacaataccatgtcggatgaaaacagtatggtc
gctctgaagatccaggtgctaaaaaacctgcagacatacctgcaagacgaggactctcga
atgcaggaggccgatcgcggatggaagaaccaatccaagcgggaagatctgaaagaaatg
ggggacatctcatcaggcatgagcagctccatcatgcagatttacctgaagcaggtgctg
gagtgcttcttccactcacagtccactgtacggcactttggcctgagtgtcatcatcctg
actctcagccagggcctcatccaccctgttcagtgcgtgccctacttgattgccatggga
accgaccctgagccaaccatgaagaacaaatccgatcaacaattggtggacatcgataag
aaatatataggcttcattcatatgaaggccgtagcagggttgaagatgtcttatcaggtg
caacaggcaataaatggatccaaaggcgcactgattcgaggttttcgccacgatgactcg
gacgtttctctctgcgctcacctctacactctggtccgaggaaaccggcaatacagacgg
gctttcctcatttccttgctcaacttgtttgatgacagctccaaaacagaagtgaacagg
ctgttgttcatcgctgacaacttggcctacttcccctaccagacccaggaggagcctctt
tttatcatgcaccatgtcgatattactctgtctgtctctggcagcaacctgctccagtct
ttcaaggagtctttacagaaaggacccatccagaaggaaaagaagacggcgacaaagaca
aagaagaagaagaaaaagcatcagagaagaaaacacagctctgatgatgacgacgacgac
aacgatgatgatgaagaggacgatgagcagagcagtagcacatccagcagcagcgatgag
gaggatgaggtggttcagagtcaaaagaaacccgtgctctcagattctgaagctgaaatg
gaggatgaggatgcagtgatggaccgtctgcctgaaaaccacggccctctgctggacttt
gccagtgcgtcacagggcattctgctgctactggtgctaaaacaacatctgaagaacctg
tatggcttctcagacagcaaaatccagaaatattccccaacggaggcgcccaaagtatac
gacaagaccgtgaacaagaaatctaaggtgcacttcaaccctcgtcagacactggattac
ctgaagcgggaccttgccaacacagatctgagcaacgagatcaagaggagaattgtgaaa
caatatttggattttaaggtactgatggagcacttggatcgtgatgaagaggacgatgag
ggtgaagcaagtgccaatgccagaaacaaagccattactgcactcttgaaggtcccaaaa
tcttcgaaccagaaccacagcaaagttgaggctgttccagtggagacagaggaggaggag
agtgaggatgaagatccccctgtgccacagcggaaaccaaggaaaggcggggagtccgca
gaggacacaggcaacctgaatgagagactgaaggccatggacatcattgccatctggtgt
cccaaatacaaagacagaccacagattgccagagtcatccagaggatcaaaactggctac
agtatacactggatgactggatcttactctgcgccctgggtcgaggtaaagaagcgggaa
ggtcgcaaaaaggttccctgggttgacaccatcaaggagtcagacatcatttacaagaaa
ataccttttacaagtggacaaaagctatcgaacaaactggcacagactttacgagcgcta
tacgctgccaaggacggggagtaa
DBGET
integrated database retrieval system
