Pseudoliparis swirei (Mariana hadal snailfish): 130205259
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Entry
130205259 CDS
T09868
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pswi03036
]
130205259 (sbno1)
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130205259 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130205259
NCBI-ProteinID:
XP_056288479
LinkDB
All DBs
Position
15:complement(20135802..20152034)
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AA seq
1406 aa
AA seq
DB search
MRIYAEKMDPGQDLLLAALSESGICPNDFGIFDDSQDAAQPSTVQQSISISALDVGESVE
YARTEPPAPVPMITIRHKPQQSTTTFVLNQLNQLPSLGANVTKQSVMNPIKHTITVTKVV
HVANSALRGCSSPSTTTFPHSASTVVPSNRDQQIQLKDLLRSGNVKGTGLKGNSLMELMR
LKPPPNIAPPVATATATGEMNNGIKKEVFGKDAARIWINDDIKMQTFPHSLKIPGMKEED
EPEEDEEEELGHAETYAEYMPMKLKIGQRHPDPVVETSSLSSVSPPEVWYRLSISEEVID
RGCLSALQLEAITYAAQQHETFLPSGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRS
LWFSVSNDLKYDSERDLRDIGAKHIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIG
ESQSGGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKL
PKARVVYASATGASEPRNMAYMNRLGIWGLKTPFREFGNFIQAVERRGVGAMEIVAMDMK
LRGMYIARQLSFTGVTFKIEEVPLTQQYINMYNKSVRLWVCARDKFQQAANLMDAEQRMK
KSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVTNGKCVVIGLQSTGEARTLEALEEG
GGELNDFVSTAKGVLQSLIEKHFPAPDRRKLYSLLGIDLLAKKTPPPTETAAQLEQKGKK
RKGSEVKKQQQKKKPRKHGGLSGTSSEESQSESDDESSKDSEDSFKSVSSGDEDDDFNPF
RDESDDDGEDDPWLIRKEPKKGKEKRKKKKKRSIDPDSIQSALLASGLGSTRPAFTTAVI
PPSAPAIVKAETQDSCLTSHDAVEHAQKMKKELLDKLADLADDLPPNTLDELIDELGGPE
NVAEMTGRKGRVVSNDDGSITYESRSELDVPVEILNLTEKQRFMDGEKNIAIISEAASSG
ISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRF
ASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRSALEIIMKSIVKLDSPLVSPPV
YFNGDFFKEIQTGLIGVGLVTIEERSGTMSLDKDYNNMGKFLNRILGMEVQQQNAVFQYF
SDTLAAVIQEAKKSGRYDMGILDLGSGDEKVKKVDCRKFLTPGYTTAGHVELYTMSVERG
MSWEEATHAWADQNGADDGFYVQMRNNKKTAILVKEVNTKKRLFLIYRPNTGKQVKLEMY
TDIKKKFKKVLSDDAKQHWIDQYKSSANICSHAYWRGNCKKASVGLQCEVGLRCRTYYVL
CGSVLSVWNELEEVLTPVSGNNVKVQIVRLRTEDGQRIVGLIIPANCVAPLSNKLSTSDQ
SQQLAVQELQKQQQLHPQSLCHAPNT
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgaggatttacgcggagaagatggatcctggacaggatttacttctcgctgccctgagt
gagagtggtatttgtccaaatgattttggcatatttgatgattctcaggatgctgcacag
ccctctacggtccagcagtctatctccatcagtgccctcgatgttggcgagtcagtggaa
tatgctcgaaccgagcctccagctccagtcccgatgattaccatcaggcacaaacctcag
caatcaaccaccacgtttgtcttaaatcagctgaatcagttgccgtcactcggagctaat
gtgaccaaacaatcggtgatgaaccctataaaacatacgataactgtcaccaaagtggtc
catgttgccaattcagccctgcgaggttgttcgagcccgtccaccacgacttttcctcac
tccgcatccacagtagtgccttctaacagagatcagcagattcagttgaaagacctcctt
cggtctggcaatgtgaagggcaccggtcttaagggcaacagcctgatggagctcatgagg
ctgaagcctccacctaacattgctccaccagtagcaacggcaacagccacaggtgaaatg
aacaatgggatcaagaaggaagtgttcggtaaagatgctgccaggatctggatcaatgac
gacatcaaaatgcaaaccttcccgcattctttgaaaatcccagggatgaaagaggaagat
gagccggaggaggacgaggaagaagaattgggccatgcagagacttatgcagagtacatg
ccaatgaaattgaagatcggccagcggcatcccgatccggtggtggagaccagttccctg
tccagtgtcagccctccagaagtctggtacagactgtccatatcggaggaggtcattgat
cgtggctgcctgtcggctctgcagctggaggccatcacatatgcggctcagcaacacgag
acattcctccccagtggtgatcgagcagcgtatttaatcggagatggagccggtgtgggg
aaaggccggaccattgcagggatcatctacgagaattaccttttaggcaggaagagatct
ctttggtttagtgtctccaacgacttgaagtatgactctgaaagggatttaagggacata
ggagccaaacacatccaggttcactcgctgaacaagttcaaatatgggaaaatctcctct
aaacacaatgggagtgtgaagaaaggtgtgatattcgccacctactcttcgttgatcgga
gagagccaatcgggagggaagtacaagaccagattccagcaacttctccactggtgtggg
gaggactttgatggagtcattgtgtatgacgagtgtcacaaagccaaaaacgtgtgtcca
atcggatcgtccaaacctacaaaaactgggcttgccgtgttggagctgcaaaacaaactc
cccaaggctcgggttgtgtatgctagcgctacaggtgcctctgaaccgcgaaatatggcc
tacatgaatcgcctgggcatctgggggcttaaaacacccttcagggaatttggcaacttt
atccaggctgttgagcgcagaggtgttggggccatggagatagtcgccatggacatgaaa
ctgagggggatgtacatagccaggcaattgagttttacaggtgtgacttttaagattgag
gaagttcccctgactcagcaatacatcaacatgtacaacaagtctgtgaggctgtgggtg
tgtgcacgtgacaagttccagcaggcggcgaacctgatggacgcagagcagcgcatgaag
aagtccatgtggggccagttctggtccgctcaccagaggttcttcaaatacctctgcatc
gcttccaaagtccgtcgagtggtgcagctggccagagaggaggtcaccaatggaaagtgt
gtggtcatcggtctccagtccaccggagaagcaagaacactggaggctttggaggaagga
ggaggagagctcaacgactttgtttcaacagcaaaaggtgtgctgcagtccctgattgag
aagcactttccagctcctgacagacggaagctttacagcctgctcggcatcgacctcttg
gctaagaagacccccccgcccactgaaacggcagcacagttggaacagaagggcaagaaa
aggaaaggttcagaggtaaaaaagcagcagcagaagaagaagcctcgcaagcacggcggc
ctgtcgggtaccagctcggaggagagccagtcggagtcggatgacgagtccagtaaagac
agcgaagacagcttcaagtccgtcagctcaggcgacgaagacgacgacttcaacccgttc
agagacgagtctgatgacgacggggaagacgatccatggctcatccgaaaggaaccaaag
aaagggaaagagaagaggaagaagaaaaagaagaggagtattgatccagactccattcaa
agtgccttgttggcctctgggttgggctccaccaggccggctttcactaccgctgtcatc
ccccccagcgcccccgccatagtcaaggcagagactcaggatagctgcctaacgagtcac
gacgcagtggaacatgctcagaaaatgaagaaagagctgctggacaaacttgccgatctg
gctgacgatctacctcccaacactctggacgagctgatagatgagctgggaggacccgag
aacgtagccgagatgaccggtcgcaaaggtcgcgtggtcagcaacgacgatggcagcatc
acgtacgagtctcgctctgaactcgacgtccccgtggagatcctcaatctcacagaaaag
cagaggttcatggatggagagaagaacattgccatcatctcggaagctgccagctctggt
atttccctgcaggccgaccgtcgggtgaagaaccagcgccggagagtccacatgacgctg
gagctgccgtggagtgccgacagagcgatacagcagttcgggagaactcacaggtccaac
caggtcacagctccagaatatgttttcctcatatcggagctcgcaggagagcagcggttt
gcatccattgttgccaaaagactagaaagcctgggagcgctcacgcacggagacagacga
gcaacagaaactcgagatctcagcaggtttaattttgacaacaaatacggtagaagtgct
ctggaaatcatcatgaagtcaatcgtgaagctcgattctccgctcgtgtctccgcccgtt
tactttaatggagatttcttcaaagaaattcaaacgggattaataggtgtgggcctcgta
accatcgaggagagatctggcacaatgtcactggacaaagactacaacaacatggggaag
ttcctgaaccgtattttggggatggaggtccagcagcaaaacgccgtgttccagtacttc
tctgacacattggcagccgttattcaagaagccaagaagagtggcagatatgacatgggc
attctggatctgggctccggtgatgagaaagtgaagaaggtagactgcaggaaatttctg
acgccgggctacactactgctggacatgtggaactatacaccatgagtgtggagaggggg
atgtcgtgggaggaagccacgcatgcttgggcagatcagaacggagcagatgatggtttt
tatgttcagatgaggaacaacaagaaaaccgccatcctggttaaagaggtgaacacgaag
aagaggctcttcctgatttacaggccaaacactggcaaacaagtcaagctggagatgtac
acggacatcaagaagaagttcaagaaggttttgtccgacgacgccaagcagcactggatt
gatcagtacaagtcatcagcaaatatctgctctcatgcttattggagaggaaactgcaag
aaggcgtcggtgggcctccagtgtgaagtcggtctccggtgtcggacgtactacgttctg
tgcggctcggtgctgagcgtgtggaacgagctggaggaagttctcactccggtcagcgga
aacaacgtgaaggtgcagatagtccgactcagaacagaagatggacagaggatagttgga
ctgatcattccagccaactgcgtggctccattaagtaacaagctgtcgacgtcggaccag
agccagcagctcgccgtgcaggagctccagaagcagcagcagctccacccccaaagcctc
tgtcacgcccccaacacatag
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