Pseudoliparis swirei (Mariana hadal snailfish): 130205302
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Entry
130205302 CDS
T09868
Name
(RefSeq) tissue alpha-L-fucosidase-like
KO
K01206
alpha-L-fucosidase [EC:
3.2.1.51
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00511
Other glycan degradation
pswi04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
130205302
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
130205302
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130205302
Enzymes [BR:
pswi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
130205302
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130205302
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha_L_fucos
Fucosidase_C
Motif
Other DBs
NCBI-GeneID:
130205302
NCBI-ProteinID:
XP_056288587
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All DBs
Position
1:complement(14468536..14474279)
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AA seq
461 aa
AA seq
DB search
MSPAERTGCVVPALLLVPFLLACAPGCTARYTANWTSLDARPLPQWYDDAKIGIFVHWGV
FSVPGIGQFSEWFWCWWKIHHRADQVRFMRENYPPGFEYADFATQFHAEFFNPDDWADIF
KASGAKYVVFTSKHHEGFTNWPSPDSWNWNSMAVGPHRDLVGELVKAVRKKSMYMGLYHS
LYEWFHPLYVADKASGYKTQDFVARKALPELYNLVNSYKPDLIWSDGDWEAPDTYWNSTE
FLAWLYNDSPVKDVVVTNDRWGKGCYCKHGGYYNCADRYTPGKLPDHKWEKCQSIDKRSW
GYRRNMKLSEIMDLPSIIKDMVYVVAMGGNYLLNIGPMSDGMIAPVFEERLRGMGAWLGI
NGEAIYASKTWRVQTENSTVNVWYTTKNNTVYAIILGWPPKQYLQLTVPKMTGATQVTLL
DYPDMPLKWASLTPSAGLVITMPYMPVSPADAWCLKLEGVV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccgcagagcggactggatgcgtcgtaccggcgctgctgctcgtccccttcctc
ctcgcctgcgcaccgggatgcacggcgcgctacaccgcgaactggaccagcctggacgcc
agacccctgccccagtggtacgacgatgcgaagatcgggattttcgtccactggggtgtc
ttctcggtccctggcatcgggcagtttagcgagtggttttggtgctggtggaagatccac
catcgcgcagaccaagttcggttcatgcgggagaactacccaccgggctttgagtacgcg
gattttgcgacccagtttcacgcagagttcttcaatccggatgactgggcagatattttt
aaagcctctggagcaaagtatgtggtattcacgtccaaacaccacgaaggattcacaaac
tggccctcaccagattcctggaactggaactcaatggctgtaggtcctcaccgggacctg
gtgggagaactggtaaaggctgtcaggaagaagtcaatgtacatgggactctaccactct
ctatatgaatggttccatcccctatatgtggcggacaaagcctctggatacaagactcag
gatttcgttgcgcgtaaggctcttccagagctatataaccttgtgaattcgtacaaacct
gatctgatctggtctgatggggactgggaagcccccgatacctactggaactccaccgag
ttcctggcctggctctacaatgacagccctgtcaaagatgtggtggtgaccaatgacagg
tggggaaagggctgctactgcaaacacggaggctactacaactgtgctgacaggtacacg
cctgggaaacttccagaccacaaatgggagaaatgccagtccatcgacaaacgctcctgg
ggctaccggagaaacatgaagctaagcgagatcatggacctgccgtccatcataaaggac
atggtgtatgtggtggcaatgggtggtaactacctgctgaacattgggccgatgtcagat
ggcatgattgccccagtgtttgaggagaggctgaggggaatgggtgcctggttggggatc
aatggggaggccatctatgcttccaaaacctggagggtccagacggagaacagcactgtc
aatgtctggtacactaccaaaaataataccgtttatgccattatccttggctggccgccc
aaacaataccttcagctcacagtgccaaagatgactggagccacacaagttacactcctg
gattatcctgatatgccactgaagtgggcatcgctgacaccatccgctggactggttatt
actatgccttatatgccagtatctcctgctgatgcctggtgtctgaaactagagggagta
gtctaa
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