Pseudoliparis swirei (Mariana hadal snailfish): 130205315
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Entry
130205315 CDS
T09868
Name
(RefSeq) syntaxin-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130205315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205315
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130205315
Membrane trafficking [BR:
pswi04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130205315
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130205315
Exosomal proteins of other body fluids (saliva and urine)
130205315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
DUF3295
Phage_TAC_4
MIT_C
SNARE
Syntaxin_2
RnlA_toxin_N
Spore-coat_CotZ
Motif
Other DBs
NCBI-GeneID:
130205315
NCBI-ProteinID:
XP_056288565
LinkDB
All DBs
Position
15:complement(9699487..9703361)
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AA seq
276 aa
AA seq
DB search
MQQHDDMADATAESTVDMEDLFKTVGEVRSLIENLSCQADKVEERQGAHLSTLNLDKRKK
DDLKLLNDETKNNANLVRAKLKTMQENFPVEKNGEHASVIQRIQKNQHSHLTRCFAEVMR
GFHTAQISFRDRCKAQIQRQLEIVDKVTTDEELEEMLYRDNLAIFITNISSDALSEIESR
HQDILCLESSIKELHEIFVDTAVLLEVQGDLINNIENNVTRAAEYVDVSKAKTSEAVAYK
KNRYKVASLPSFFKSFKRKSSAKTAPDQKASNLNLD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcacgatgatatggcagatgctacagcagagagcacggtggacatggaggac
ttattcaaaacggtgggggaggtgagaagcctcattgaaaacctctcctgccaagcagat
aaggtggaggaacgacagggggctcacctttctactctaaacctagacaagagaaagaaa
gacgacctgaagctgctgaacgatgagaccaagaacaacgccaacttggtccgagccaag
ttaaaaacaatgcaggagaactttcctgtggagaagaacggtgaacacgcctcagtaatt
cagcgtattcagaagaaccagcactcccatctgactcggtgctttgctgaagtcatgagg
ggcttccatacggcgcagatctccttcagagacagatgcaaagcacagatccagagacag
ctggagattgtggataaagtgacaacagatgaagagttggaggagatgctgtaccgggac
aacctcgccatctttataaccaacatcagctctgacgctctgagcgagattgagtctcgt
catcaggacatcctttgcctcgagtccagcatcaaagagctgcacgagatattcgtcgac
actgccgtgctgctggaggttcagggagacttgatcaacaatatagaaaataatgtgacc
cgtgctgcagagtatgtggacgtgtccaaagcaaagacctctgaagctgttgcatacaag
aagaaccggtacaaggtcgcttctctcccgagcttcttcaagtccttcaagaggaaaagc
tctgctaaaacggctcctgatcaaaaggcctctaacttaaacctcgactga
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