Pseudoliparis swirei (Mariana hadal snailfish): 130205317
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Entry
130205317 CDS
T09868
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8 isoform X1
KO
K09293
paired box protein 8
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130205317 (pax8)
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
130205317 (pax8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
HTH_SB
Ribosomal_S13_N
Motif
Other DBs
NCBI-GeneID:
130205317
NCBI-ProteinID:
XP_056288570
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Position
15:14095609..14104441
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AA seq
461 aa
AA seq
DB search
MSNYAGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKI
LGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKKQNPTMFAWEIRDRLLAEGVCDSDT
VPSVSSINRIIRTKVQQPFNLPLDGKGLSPGHTLIPSSAVTPPESPHSDSLGSTYSISGL
LGIPQPSAEGKRSHDDSDQESCRHSVDSQGSGGVPRKQMRVDHFSAATQHLDCGFDRHHY
PPDSFGSASSSKTEQTLYPLSLINGSLDEAKTSLSTSGSSIGRNLTAHQSYTMVTESLQP
LPLCLKQEMSPEVTSTSPSPNMALSNLAFVDLQALQKPVSVSSSCSNSNHFPNAFNSFSH
HAPVYGQFSSQSIISGRDMVSSTLPGYPPHIPSQAQSGYSSSAITGMVAAGTDYSGQTYS
HSPYTYSEAWRFTNSSILGSPYYYSTASRTAPPSSAAYDHL
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtccaactacgctggaagaggtcatgggggtcttaaccaactaggtggaatgtttgtt
aatggacgtccacttccggaggtgatccggcaacgcatcgtggacatggcccaccagggg
gttcggccatgtgacatctcccggcagctcagagtcagccacggctgcgtgagcaagatc
ctgggacgttactacgagaccggcagcatcaaacccggcgtgatcggcggctccaagccc
aaggtggccaccccaaaggttgtggataaaatagcagattacaagaagcagaatcccacc
atgttcgcctgggaaatcagggacagactgctggcggagggagtgtgtgacagcgacacg
gtgcccagcgtgagctccattaacagaataattcgaacaaaggtccaacagcctttcaat
ctgcctctggatggaaaaggcttgagtccaggacatactttaatcccgagttcagcagtc
actcctcccgagtctccacattcagactctttgggctccacctactccatcagcggcttg
ttgggtatcccccaacccagcgccgagggcaagaggagccacgatgacagtgatcaggag
agttgtcggcacagcgtggactctcagggtagcggaggcgtcccgaggaaacaaatgaga
gtggatcacttttcagccgccacgcaacatctggactgtgggtttgatcgtcaccactat
cccccggactcatttggctccgcctccagcagcaagacagagcagactttgtacccgctg
tcgctcatcaatggcagcctagacgaggccaagaccagcctctcaacatccggctcctcc
attggacggaatctgacggcacatcagagctacaccatggtgaccgaatccctacagccc
ctgccgctatgcctaaaacaggaaatgtccccagaagtgacgagcacgagcccctcccca
aacatggcattgtccaacctggcgttcgtggatctgcaggcgctgcagaagcccgtgtct
gtcagcagcagctgcagcaactccaaccatttccccaacgccttcaactcattctcccat
catgcaccagtttacgggcagttcagcagtcagtctatcatctcagggcgtgacatggtg
agctccaccctgccgggctacccaccacacatcccctcccaagctcagtcaggatactcc
tcctctgccatcacaggaatggtcgcagcgggcacagactattcgggtcagacctacagc
cattcgccctacacctacagtgaagcctggaggttcaccaactccagcattctgggttca
ccctattattacagcaccgcctcccgcaccgctccaccgtcttcagccgcctacgaccac
ctctag
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