Pseudoliparis swirei (Mariana hadal snailfish): 130205366
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Entry
130205366 CDS
T09868
Symbol
kcnt1a
Name
(RefSeq) LOW QUALITY PROTEIN: potassium channel subfamily T member 1
KO
K04946
potassium channel subfamily T member 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pswi04040
]
130205366 (kcnt1a)
Ion channels [BR:
pswi04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
130205366 (kcnt1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
BK_channel_a
Ion_trans_2
Lig_chan
Motif
Other DBs
NCBI-GeneID:
130205366
NCBI-ProteinID:
XP_056288668
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Position
15:complement(17681133..17707477)
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AA seq
1184 aa
AA seq
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MEQQENEEVPPLPLRLRFRDLLLGDESFQNDDRVQVEFYVNENTFKERLKLFFIKNQRSS
LLIRVFNFSLKLLTCLLYIIRVVTDHPGQGADHSAGQQNAPSGNNKXEINWELIFWVDRK
VPVWAIQVIVAIISFLETMLLMYLSYKGNIWEQIFQVSFLLEMINTVPFIITIFWPSIRN
IFIPVFLNCWLAKCALENMINDVHRAIQRTNSAMFNQVLILICTLLCLVFTGSCSTCGIQ
HLERAGKNISLFNSFYFCIVTFSTVGFGDVTPRIWPSQLLVVIMICVALVVLPLQFEELM
YLWMERQKSGGNYSRHRAQTEKHVVLCVSALKIDLLMDFLNEFYAHPRLQDYYVVILCPS
EMDLQVRRVLQIPLWSQRVIYLQGSVLKDQDLLRAKMDDAEACFILSSRNEVDRMAADHQ
TILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEEFKYAMLALNCVCPATSTLV
TLLVHTSRGREGQQSPEQWQRMYGCCSGNEVYHIRVCDSKFFGEYNGKSFTYASFHAHKK
YGVCLIGIKKEDNKSILLNPGPCHIMAATDTCYYINITKEENSAFIFNQEERKGRSAGGL
FDGPLQLPVHSIIARMGTVAMDLQNTSPPDVPCGKLVPPTVNGTRRRRPSISPVQEIADS
ASILPCDLLSDQSEDDSVFTDEKGHSSTEYVKGYPPNSPYIGSSPTLCHLLAEKASFCCL
RLDQGCRHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELKPIVLLLD
NPPDNHFLEAICCFPMVYYMAGTIDNLDSLLQCGIIYADNLVVVDKESTMSAEEDYMADA
KTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKKERDKGSNLAFM
FRLPFAAGKVFSISMLDTLLYQSFVKDYMILIARLLLGLDTTPGSGFLCAMKITEEDLWI
STYGRLYQKLCSSSAEIPIGIYRTXSHIFQTSEPHPPKSQVSVSVSDCDAAKDKGDESRS
NDQSDHPLLRKKSMQWARRLSKKSVRWQGVSRDSSKDHAQRIAQQRLNLYRRSEREELTE
LVRNRMRHLGLPTSGYDDLTNMTASDVMNRVNLGYLQDEQNDQQNTLSYVLINPSPNTRL
ELNDVVYLIRSDPLVHVPEEPPVHRSSLRERHESSADAKGDTQL
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcaggagaacgaggaggtgcctccgctgcccctccgcttacgcttcagagac
ctgctgctcggggacgagagcttccagaacgatgacagggttcaggtggagttctatgtg
aatgaaaacaccttcaaggagcggctaaagctcttcttcatcaaaaaccaaagatcaagc
cttctgatacgcgtgttcaacttctccctgaagctgctcacctgtctgctgtacatcatc
cgagtggttacagaccaccccggtcagggcgccgatcacagcgcgggacaacaaaacgct
cccagtggcaacaacaaatgagaaataaactgggagttgatcttctgggtggacagaaaa
gttcctgtgtgggccattcaagtgattgtcgccatcattagtttcctggagactatgtta
ctgatgtatctgagctacaaggggaacatttgggagcagatattccaggtgtcctttctt
ctggagatgatcaacacggttcccttcatcattacgatcttctggccctccataagaaac
atcttcattcccgtgtttctcaactgctggctcgccaagtgcgctttggagaacatgatc
aatgatgtccacagagcaatccagaggaccaactcggccatgttcaaccaggtcctgatt
ctcatctgcaccctgctctgcctggtcttcactgggtcctgcagcacgtgtggaatccag
cacctggagcgagcagggaaaaacatctccctcttcaactccttctacttctgcatcgtc
accttctccaccgtgggctttggagacgtcactccgcgcatttggccctcccagctgctg
gtggtcatcatgatctgcgtagctctggtggttctgcctctgcagtttgaggagctgatg
tacttatggatggagagacagaagtccggagggaattacagccgccaccgagcgcagaca
gagaaacacgtggtgctgtgtgtcagtgcactaaagatagacctgctcatggatttcctc
aacgaattctatgcccatcccaggctgcaggattactatgtggtgatcctgtgcccgagt
gaaatggacctccaggtgcggagagtgttgcagatccctctgtggtcccaaagggtcatc
tatctgcagggatccgttctcaaagaccaggacctgctcagagccaaaatggacgacgcc
gaggcttgtttcattctgagcagtcgcaacgaggtggatcgcatggctgcggaccaccag
accatcctgagagcctgggcagtgaaggactttgccccaaactgccccctctatgtccag
atactcaaacctgaaaacaagttccatgtcaaatttgcagatcacgttgtgtgtgaggag
gagttcaagtacgccatgttggctctcaactgtgtgtgtcctgccacctccaccttggtc
acgctcctcgtgcacacctctcgcggacgagaaggacaacagtccccggagcagtggcag
aggatgtacggatgttgctctggcaacgaggtctaccacatccgagtgtgtgacagcaag
ttctttggagagtataacggcaaaagctttacgtacgcctcctttcacgctcacaagaag
tacggcgtgtgtctgatcggaataaagaaggaagacaacaagagcatcctgctgaacccc
gggccgtgccacatcatggccgccacagacacctgctactacatcaacatcaccaaggag
gagaactcagccttcatcttcaaccaggaggagaggaagggccgctccgccgggggtctc
ttcgacggacccttgcagcttcctgtgcacagcatcatagctcgcatgggcaccgtggcc
atggatcttcagaatacgagtccgcccgacgtgccatgtggtaaactagtcccgcctaca
gtgaacggaaccaggcgccgccggccgagcatcagtccggtgcaggagatcgccgactcc
gcctcaattctgccatgtgacctcctcagcgaccaatcagaggatgactccgtgttcacg
gatgagaagggccactcgtctactgagtacgtgaaaggttatccccctaactcgccgtac
atcgggagctcgcccaccctgtgccatctgctggctgagaaagcttctttttgctgccta
cgtctggaccagggttgccggcacaacagctttgaggacgcgaaggcttacggctttaaa
aacaagctcatcattgtgtcggccgagactgcggggaacggcctttataacttcatcgtg
cccctcagagcttattacagacccaggaaagaactcaaacccatcgtcctgctgctagat
aacccgccagataatcactttctggaggccatctgctgtttcccgatggtctactacatg
gcggggaccatagacaatctggacagcctcctgcagtgtggtattatctacgctgataat
ttagttgtcgtggataaagagagtacaatgagtgccgaggaggactacatggccgacgcc
aaaaccattgtcaacgtgcagacgatgttcaggttgtttcccagcctcagcatcatcaca
gagcttactcatccatccaacatgagattcatgcagtttagagcaaaggactgctattca
ctggccctctccaagctggagaagaaagagcgtgataaaggttccaacttggccttcatg
tttcgcctacccttcgctgcagggaaagtgttcagcatcagcatgttggacaccctgctg
tatcagtcttttgtgaaggactacatgatcctgattgcgaggctgctgctggggctggac
accactccaggatcaggattcctttgtgctatgaagataacagaagaagatctgtggatt
agtacttatggaagactgtaccagaaactctgctcctctagtgccgagattcccatcggg
atctatcggacataatcccacattttccagacttctgagccccacccccccaagtcacag
gtgtcggtcagcgtctccgactgcgacgccgccaaggacaagggggacgagtctcgcagc
aacgaccaatcggatcaccccctgctgaggaagaagagcatgcagtgggcgcgacgcctg
agcaagaagagcgtcaggtggcagggggtgagccgggactccagcaaggaccacgcccag
cgcatcgcccagcagcgcctcaacctctaccggcgctccgagagggaggagctgacggag
ctggtccgcaaccgcatgcggcacctgggcctccccacctcgggatacgacgacttaact
aatatgacggccagcgatgtcatgaacagagtcaacctgggatacctgcaagacgagcag
aatgaccagcagaacacgctgtcctacgtcctgatcaacccgtctcccaacacccggctg
gagctcaacgatgttgtgtacctgattcgttcggaccctctggttcacgtcccagaggag
cctcccgtccacagaagcagcctgagagagagacacgagtccagcgcagacgccaaagga
gacacacagctctga
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