Pseudoliparis swirei (Mariana hadal snailfish): 130205367
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Entry
130205367 CDS
T09868
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
pswi01100
Metabolic pathways
Module
pswi_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
130205367 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pswi01003
]
130205367 (csgalnact1a)
Enzymes [BR:
pswi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
130205367 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
130205367 (csgalnact1a)
Glycosyltransferases [BR:
pswi01003
]
Glycan extension
O-Glycan
130205367 (csgalnact1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
130205367
NCBI-ProteinID:
XP_056288669
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Position
15:complement(17644821..17669818)
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AA seq
584 aa
AA seq
DB search
MLHAAMLRRGLLARVSRVGGVLVLLCCSLSLLYVMTCSPPHHDDPPLSHALPRAGPNHPS
LGGTGPGIGAGAPQSGGPPGAQSYQVLLQEREEQHHLHISSLKKQIAQLKEALQERSQQL
KGVQESLKRATGGPSGGLDAGSQGGGLGEVQGVKSQQGDLQEFLRSQLSKAEVTAGARLP
SEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREALGEVLETALHSLNTPSSQQDS
RSAAENTQTSKVYTPSDFIEGVTRTEKDKGTLYELTFRGESSTEFRRLVLFRPFGPLMRV
KNERVNTANIPINIIVPLSRRTDKFKHFMHNFREVCVRQDGRVHLTVVYFGKEQMSEVRG
TLENTSREVNFKNFTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIYFTADFLNTC
RLNTQPGKKVFYPVLFSQYNPTLIYGSQEHVPPVEQQLVIKKDTGFWRDFGFGMTCQYRS
DFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKQCADELPPDQYR
MCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKLQQQNSNPKKS
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcttcatgcagcgatgttgcggcgtggcctgctagcccgggtctcccgtgttggaggc
gtgctggttctcctttgctgctcactgtcgctcctctatgtgatgacctgcagtccgccg
caccacgacgaccctccgctgagccacgctctcccccgtgccggacccaaccacccaagc
ctcgggggcacgggcccggggattggagcgggagcccctcaaagcggcggcccccccggt
gctcaatcttatcaggtgctcctccaagagcgcgaggagcagcaccacctccacatctcc
tccttgaagaagcagatagctcagctgaaggaggccttgcaggagcgcagccagcagctg
aaaggagtgcaggagagtctgaagagagccaccgggggcccatcaggaggactggatgct
gggtcgcagggaggtggtctcggggaggtccagggggtcaagagccagcagggagacctc
caggagttcctgaggagccagctgtcgaaggccgaagtcaccgcgggagcccgattgccc
agcgagtacgcggtggtgccctttgagagtttcaccctgcagagggtgtaccagctggag
atggggctgacgcggcaccccgaggagaagccggtgaggaaggacaagagagaggcgctg
ggggaggtgctggagacggccctgcacagcctcaacacgccgtcgtcccagcaagacagc
cggagcgcagccgaaaacactcaaacaagcaaagtgtacacaccctccgacttcatagaa
ggtgtcacccggacagagaaggacaaaggcaccctgtacgagctgaccttcagaggggag
tcgagcaccgagttccggcgcctggtcctcttccgccccttcggaccgctgatgagggtg
aagaacgagagggtgaacacggccaacatccccatcaacatcatcgtgccgctgtccagg
cgcacggacaagttcaaacatttcatgcacaacttcagggaagtctgtgtgcgccaagac
ggccgggtccatctgacggtggtatattttgggaaggaacagatgagcgaagtccgcggc
actctggagaacacatccagggaagttaattttaagaacttcactctgctgcagctggac
gaggagttttctcggggtcggggtctcgacgtcggggcccgagcctggaagggaggcaac
gtgttgcttttcttctgcgacgtggacatctacttcaccgctgacttcctcaacacctgt
cgactcaacacgcagcctggtaaaaaggtgttctacccggtgttgttcagccagtacaac
cccaccctgatctacggcagccaggagcacgtcccccccgtagagcaacagctggtgatc
aagaaagacacggggttctggagggattttggtttcggcatgacgtgccaatacaggtcc
gacttcatcaacataggaggttttgacatcgacatcaaaggctgggggggtgaagatgtc
cacctgtacaggaagtacctccatagcaacctcctggtggtccgagcgccgtcgcgaggc
ttgttccacctgtggcacgagaagcagtgcgccgacgagctccctccagaccagtaccgc
atgtgcatgcagtccaaggccatgaacgaggcctcgcacggccagctggggatgctcttc
ttcaggcacgagatcgaagctcacctccgcaaacagaaactgcagcagcagaactcaaac
cccaagaagtcatga
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