Pseudoliparis swirei (Mariana hadal snailfish): 130205380
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Entry
130205380 CDS
T09868
Symbol
zer1
Name
(RefSeq) protein zer-1 homolog
KO
K10350
Zyg-11 protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pswi04121
]
130205380 (zer1)
Ubiquitin system [BR:
pswi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
130205380 (zer1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
130205380
NCBI-ProteinID:
XP_056288682
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Position
15:complement(174347..202452)
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AA seq
782 aa
AA seq
DB search
MAAKAGDNPDSLMSVATVFCLRNLRKTMCYQGFRSKLSLRSDIFLPSEICDKLVNTYMEL
VHTDSNFEPEESFFQLFSDPRSTRLTRVQLREDFVRDRDLEAIRKQDLIELHLTYCNSLS
SRSLKTLTCFRETLVSLCLFGCSHIFYRKGGAPLACNEDTEDEDEESPASRQALETDFNF
QGFNRLRLLNLGGLPDEVDAENLLKPLKALTSLDLSNVHLLGTSFLTQWKDRLASLVLYN
VDLSEELVSTVVEITNLRHLDVSRESRRTSKCKMTRKTLTAIVQRLVHLVSLDVSGHMML
DNCTVPHFEDAMGRPSIEPCKSSIYPFQELKRPLQFLGLYDTTLCNVTHIPAYKVTGSKN
EDQVLNAIEVYTEFRPELAQRAINQLFDIARIQHCSQLLRALQLVIAALKCHKYDKSIQV
TGSAALFYLTNTEYRSDQSVRLRREVIQVVLNGMEQYQEVTVQRNCCLTLCNFSIPEELE
FQYSRVNQLLLKILEPARQDESIQRIAVHLCNALVCQVDNHHKEAVGKMGFVKTMLNLIQ
KKLQDRLCDQVMEFSWSALWNITDETPDNCQMFLNCRGMSLFLECLQEFPDKQELHRNML
GLLGNVAEVKALRPQLLTPQFISVFSELLGSKADGIEVSYNACGVLSHIVFDGPEVWSME
EPLRVTVMDQMWDAIRSWDVSSRRNINYRSFEPILRLLPQSIAPVSQHWATWALFNLVSV
YPSKYCPLLIKEGGVTLLEKVLELDSSDPETKDMASKVMEQCENFKEDPMETSQEVNSGQ
RG
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaagcaggagacaaccctgacagcctcatgtcggtggcaacggtcttctgc
ctgaggaacctcaggaagaccatgtgctaccagggattcaggagcaagctgagtctgcgc
tcggacatcttccttcccagcgaaatctgcgataagctggtcaacacatatatggagttg
gtccacacagacagtaactttgaaccagaagaaagcttcttccaactcttctcagaccct
cggagcaccagactgacccgggtgcagctgagagaagactttgttcgggacagggatctg
gaggccattcggaaacaggacctgattgagctccacctcacctactgcaacagcctgtcc
tcccgcagcctgaaaacactcacctgcttccgggagaccttggtgtctctttgtctcttc
ggctgcagccacatcttctacaggaagggcggcgccccgctcgcctgcaatgaagacacc
gaggacgaggacgaggagagcccagcttctcggcaggctctagagacagactttaacttc
caggggttcaaccgcctccggctgctcaatttaggaggcctgcctgacgaggtggacgct
gagaacctgctcaagcccctgaaggctctcacctcactagatctgtctaatgtacacttg
ctggggacatcgtttctcacccagtggaaagatagactggcatctcttgttctctacaac
gtggacctgtcagaggagctggtcagtaccgtggtagagatcactaacctcagacacctt
gacgtctcgcgggagagccggcggacctctaagtgtaagatgaccaggaagaccctgacg
gccatcgtccagcgtctggtccacctggtgtcgctggacgtctcggggcacatgatgctg
gacaactgcaccgttccacactttgaagacgcgatgggtcggccgagcatcgagccttgc
aaaagcagcatctatcctttccaggagctgaagaggccgctgcagttcctgggcctgtac
gacaccaccctctgtaatgtgacccacatccctgcttataaggtgactggatcaaagaat
gaggaccaggtcctgaatgccatcgaggtttacaccgagttccgccccgagctggcccaa
agagccatcaaccagctgtttgacatcgccaggatacagcactgcagccagctgctgcga
gctctgcagctggtcatagcagcactaaagtgccacaaatatgataagagcatccaggtg
acgggcagcgccgctctgttctacctgaccaacaccgagtaccgcagcgaccagagtgtg
cgcttgcgtagggaggtcatccaggtggtcctcaatggaatggagcagtaccaggaggtc
accgtccagaggaactgctgcctgactctgtgtaacttcagcattccagaggagctggag
ttccagtacagtcgggtcaaccagctgctgctgaagatcctggagccggcccggcaggac
gagtccatccagaggatcgcggtgcacctgtgcaacgccttggtgtgtcaggtggacaac
caccacaaggaggccgtgggcaagatgggcttcgtcaagacgatgttgaatttaatccag
aagaagttacaggaccggctgtgtgaccaggtgatggagttctcctggagcgctctgtgg
aacatcaccgatgagacgcctgataactgccagatgttcctcaactgtcggggcatgagt
ctgttcctggagtgtctgcaggagtttccagacaaacaggagcttcaccgcaacatgttg
gggctgctggggaatgtagctgaggtgaaggctctgaggccacagctgctcaccccccag
ttcatctcagtgttcagcgagctgctgggcagtaaggccgatggcatcgaggtgtcctac
aacgcgtgcggcgtgctgtcccacatcgtgttcgacgggccggaggtgtggtccatggag
gagccgctcagggtcacggtgatggaccagatgtgggacgccatccggagctgggacgtc
agctcgcggcgcaacatcaactacaggtccttcgagcccatcctgcgcctgctgccccag
agcatcgccccggtcagccagcactgggccacctgggcgctcttcaacctggtgtcggtg
tacccaagcaagtactgtcccctgctgatcaaggagggaggagtcactctgctggagaag
gttctggaactggacagctccgacccggagaccaaggacatggccagcaaagtgatggag
cagtgtgagaacttcaaagaagaccccatggaaaccagccaggaggtgaactctggccaa
agaggatga
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