Pseudoliparis swirei (Mariana hadal snailfish): 130205485
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Entry
130205485 CDS
T09868
Symbol
lman1
Name
(RefSeq) protein ERGIC-53
KO
K10080
lectin, mannose-binding 1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130205485 (lman1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205485 (lman1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pswi04091
]
130205485 (lman1)
Membrane trafficking [BR:
pswi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
130205485 (lman1)
Lectins [BR:
pswi04091
]
L-type lectins
130205485 (lman1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
Hanta_Gn-H
GCN5L1
Motif
Other DBs
NCBI-GeneID:
130205485
NCBI-ProteinID:
XP_056288874
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All DBs
Position
15:complement(20537067..20551170)
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AA seq
517 aa
AA seq
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MAVSTARRPAANARVLIITFLTTLICRSGVADVIPGAPTPEELPHRRFEYKYSFKGPHLS
QTDGGIPFWIHSGNAIPSADQVRITPSLRSQKGSVWTKNKVNFAHWEAEVTFRVSGRGRM
GADGLAVWFTSEQGLAGPVYGAADQWNGVGIFFDSFDNDGKKNNPSIVVVGNNGKLVYDH
QNDGTTQALGTCLRDFRNKPYPIRAKITYYKKTLTVMINNGFTPDRDDYEFCTRVDGMVL
PGVGFFGISAATGGLADDHDVLSFLLFTLTEPGQQLPPTESEIPKEEKDKYQEEFQNFQQ
ELDKKKEEFQKEHPDVHGEQIEDMYESVNDREIRQVFEGQNQIHLEIKQLHRQLAMVLDE
QRRYVSVISNEVIKWEANAKAGQLDAAGQQQLGSIMANQLEVRQSLNELRTSFHESLKQI
SSAQHQGNAAGIGSYETVQHFNDIKEHLHMVKRDVEHLVQRNSQNPAEKAVKCPDPPAMP
TCLSTLHFVIFIIVQSVLFFCYIMYKTQQEAAAKKFF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtccacagcgcggcgcccggctgctaacgctcgtgtgttgataataactttt
ctcaccacgctaatatgtcgcagcggggtcgctgacgtcatccccggtgccccgacgccg
gaagagcttccgcaccgccggttcgagtacaaatacagctttaaaggacctcacctgtct
cagacggacggcggcatcccgttttggatccacagtggaaatgccattcccagtgcagac
caggtgcgcattacgccgtccctcaggagtcagaagggctccgtgtggacaaaaaacaaa
gtcaactttgcccattgggaggccgaggtgaccttcagggtgtctggaagaggccggatg
ggagcggacggtttggccgtgtggttcaccagcgagcaaggcctcgccggtccggtctac
ggcgccgccgaccagtggaatggagttggaatcttctttgactcgtttgacaacgacgga
aagaaaaataacccatcgatagttgttgtgggaaacaatggcaaacttgtttatgaccat
caaaacgacggcaccacacaggccctcggcacgtgtttgcgagacttccgcaacaaaccc
tatcccatccgagccaaaataacgtactacaagaagacgctgacggtgatgatcaacaat
ggcttcactcccgatagagacgactacgagttctgcacaagggtggacggcatggtcctc
cccggcgtcggcttcttcggcatctcggctgccaccggtggtctagcagacgaccacgat
gttttgtccttcttgttgttcacactcacagagccaggccagcaactgcccccgactgaa
tctgagattcctaaagaagagaaggacaagtaccaagaggaatttcagaacttccagcaa
gagctcgacaaaaagaaagaggagtttcagaaagagcacccagacgtccatggagagcaa
attgaggacatgtacgagagcgtgaatgaccgggagatccgtcaggtgtttgagggccag
aaccagatccacctggagatcaaacagctgcaccggcagctcgccatggtcctggacgag
cagcggcggtacgtgtcggtcatcagcaacgaggtcatcaagtgggaggccaacgccaag
gcgggacagctggatgctgcaggccaacaacagttgggctccatcatggccaaccagctg
gaggttcgccagagtctgaatgagctcagaacctccttccacgagtccctgaagcagatc
agctccgcccagcaccaggggaacgcagccggcatcggatcctacgagacggtgcagcac
ttcaacgacatcaaggagcacctgcacatggtcaaaagggacgtggagcacctggtgcag
cgtaactctcagaatccagctgaaaaggccgtgaagtgccccgatccgccggccatgccg
acctgcctgtccacgctccactttgtgatcttcatcatcgtccagtcggtcctgttcttc
tgctacatcatgtacaaaactcaacaagaagcagcagcaaagaagttcttttga
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