Pseudoliparis swirei (Mariana hadal snailfish): 130205498
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Entry
130205498 CDS
T09868
Name
(RefSeq) transcription factor Dp-1-like
KO
K04683
transcription factor Dp-1
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03083
Polycomb repressive complex
pswi04110
Cell cycle
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130205498
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130205498
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130205498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pswi03000
]
130205498
03036 Chromosome and associated proteins [BR:
pswi03036
]
130205498
Transcription factors [BR:
pswi03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
130205498
Chromosome and associated proteins [BR:
pswi03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
130205498
BRITE hierarchy
Motif
Pfam:
DP
E2F_TDP
alpha-hel2
Motif
Other DBs
NCBI-GeneID:
130205498
NCBI-ProteinID:
XP_056288898
LinkDB
All DBs
Position
2:complement(8853871..8864948)
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AA seq
413 aa
AA seq
DB search
MAKDVGLIETNGELKVFIDQNLSPSKGVLSLVTVQSTSLPVAKQLLPKTLGPSNVNIAAH
MQHVPHMVIGTPQRPTVSNTILVNSPHTPSSQFLTQSQPSDASPWSSGKRGKKGEKNGKG
LRHFSMKVCEKVQKKGITTYNEVADELVAEFSSADSHMSPNDAHVYDQKNIRRRVYDALN
VLMAMNIISKEKKEIKWIGLPTNSAQECQNLEVERQRRLERIKQKQSQLQELILQQIAFK
NLVQRNRLTEQQANRPPPPNSIIHLPFIIVNTSKKTVIDCSISNDKFEYLFNFDSMFEIH
DDIEVLKRMGMACGLEVGKCSPEDLKVARSLVPKALEPYVIEMAKGPISNVYITGGSSAN
GTRYPASSDGCTDGTMASSSNDSHYSGSRVETPVSYMGDDDDEDEYDENDDDD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagatgttggtctgatagaaacaaacggagagttgaaggttttcatcgatcaa
aatctgagccctagcaaaggtgtcttgtctttggttactgtccagtctacatctctcccc
gtagccaaacagctactacccaaaactcttgggccatccaatgtgaacattgctgcacac
atgcaacatgtgccacacatggtgataggaaccccccagcggccgacggtatccaatacc
attttggtaaacagtccacacacacccagttcccagttcctcactcaaagtcaaccatca
gatgcctctccgtggtcatcaggaaaacgtggtaaaaagggggaaaagaacggaaaggga
ttgaggcatttctccatgaaagtgtgtgagaaggttcagaagaaaggaataaccacctac
aatgaagtggcagatgaactggttgcagaattcagctctgcagacagccacatgtcaccc
aatgacgcgcacgtgtatgaccagaagaacattcggcggcgtgtgtacgatgcacttaat
gtgcttatggccatgaacattatctctaaagaaaagaaagaaatcaaatggattggcctt
cccaccaactcggcgcaagagtgccaaaaccttgaggttgagagacaaaggcggctggag
agaattaagcagaaacaatcacagcttcaggagctcatactgcagcaaatagcttttaag
aacctggttcagcggaacagactgacggagcagcaagcaaaccgacctccgcctcccaac
tccatcatccacctcccgttcattatcgtcaacaccagcaagaaaactgtcattgactgc
agcatctccaacgacaagttcgagtatttgttcaatttcgacagcatgtttgagatccat
gacgacatcgaggtgctgaaacgtatgggcatggcctgcggtctggaggtggggaagtgt
tctccggaggatctgaaggttgcgcgtagcctggtgcccaaagctctggagccctacgtg
atagagatggcaaagggccccatcagtaacgtctacatcactggagggtcctcggctaat
ggaacccgttaccctgcaagcagtgacggctgcaccgacggcaccatggcctccagctcg
aacgactctcactacagcgggtctcgcgtggagacgccagtgtcttacatgggggacgac
gacgacgaggacgagtacgacgagaacgacgacgacgactag
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