Pseudoliparis swirei (Mariana hadal snailfish): 130205535
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Entry
130205535 CDS
T09868
Symbol
wdr45
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130205535 (wdr45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205535 (wdr45)
Membrane trafficking [BR:
pswi04131
]
Autophagy
Other autophagy associated proteins
Others
130205535 (wdr45)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_IFT122_1st
Beta-prop_EML_2
BCAS3_WD40
WDR55
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
CNH
Beta-prop_EML
Beta-prop_IFT80_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
130205535
NCBI-ProteinID:
XP_056288959
LinkDB
All DBs
Position
15:complement(21891721..21903973)
Genome browser
AA seq
358 aa
AA seq
DB search
MTQQRGVNSLQFNQNQSCFCCAMETGVRIYNVEPLMEKGHLDHEQVGSVASCSMLHRSNL
LAVIGGGVNPKFSEISVLVWDDARECRDPKDKLVLEFTFTKPVLAVRMRHDKIIIVLKNR
IYVYSFPENPVKLFEFDTRDNPKGLCDLCPSLEKQLLVFPGHKCGSLQLVDLSNTKPGTS
SAPFTVNAHQSEIACVALNQPGSVAASASRKGTLIRLFDTTTRDKLVELRRGTDAATLYC
INFSHDSSFLCASSDKGTVHIFALKDTKLNRRSALARVGKVGPVIGQYVDSQWSLASFTV
PAECACICAFGKNTSKNVNSVIAICVDGTFHKYVFTPDGNCNREAFDVYLDICDDDDF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgactcagcagagaggagtcaacagtctgcagttcaaccagaaccagagctgtttctgc
tgcgccatggagacgggggtccggatctacaacgtggagccgctgatggagaaaggtcac
ctggaccatgagcaggtgggcagtgtggcctcctgctccatgttgcatcgctccaacctg
ctggctgtcattgggggcggagtcaaccccaaattctctgaaatatctgttctggtctgg
gacgacgctcgagagtgtcgagacccaaaagacaaactggtcctggagttcaccttcacc
aaaccagtgctggctgttcgcatgaggcacgacaagatcatcatcgtcttgaagaacagg
atctacgtctacagtttcccagagaacccggtcaaactgtttgagttcgacaccagagac
aaccccaaaggtttgtgtgacttgtgtccgagtctggagaaacagctgctggtgttcccg
ggtcataaatgcggcagcttgcagctggtggacttgtccaacaccaagcccggcacctcg
tcggcgccgttcaccgtcaacgcccaccagagcgagatcgcctgcgtggcgctgaaccag
ccgggcagcgtggcggcgtcggcctcgcgcaaggggacgctcatccgcctgttcgacacc
accacccgggacaagctggtggagctgcggcgggggacggacgccgccaccctctactgc
atcaacttcagccacgactcgtccttcctgtgcgcctccagcgacaaaggaaccgtccac
atcttcgctctcaaggacaccaaactcaaccgccgctccgcgctggcgcgtgtgggcaag
gtgggccctgtgattggtcagtacgtggacagccagtggtcgttggcgagcttcacggtg
ccggctgagtgcgcctgcatctgtgcgtttgggaagaacacgtccaagaacgtgaactcc
gtcatcgccatctgtgtggacgggacgttccacaagtacgtgttcacccccgatgggaac
tgcaaccgggaggccttcgatgtgtatctggacatctgtgacgatgacgacttctga
DBGET
integrated database retrieval system
