Pseudoliparis swirei (Mariana hadal snailfish): 130205543
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Entry
130205543 CDS
T09868
Symbol
cldn5b
Name
(RefSeq) claudin-5b
KO
K06087
claudin
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi04382
Cornified envelope formation
pswi04514
Cell adhesion molecules
pswi04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
130205543 (cldn5b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130205543 (cldn5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130205543 (cldn5b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
130205543 (cldn5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pswi03037
]
130205543 (cldn5b)
04147 Exosome [BR:
pswi04147
]
130205543 (cldn5b)
04515 Cell adhesion molecules [BR:
pswi04515
]
130205543 (cldn5b)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130205543 (cldn5b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
130205543 (cldn5b)
Exosomal proteins of colorectal cancer cells
130205543 (cldn5b)
Cell adhesion molecules [BR:
pswi04515
]
Immunoglobulin superfamily
L1 family
130205543 (cldn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
ScfRs
Clc-like
Amastin
Motif
Other DBs
NCBI-GeneID:
130205543
NCBI-ProteinID:
XP_056288971
LinkDB
All DBs
Position
15:22190387..22191247
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AA seq
216 aa
AA seq
DB search
MLAACLEPLGLALGFAGSLLVMVACALPMWKVTAFIDSNIVVAQTLWDGLWMSCVAQSTG
HVQCKVHESVLALTRDLQTARALTVVAAVLAVAALSVTVAGAQCTTCIRAEAVKRRVVGV
GGALHAAGGLSVLVPLCWMAHGIIVDFHDPRVPPSKKREIGAAIYIGWAGAALLLLGGAL
LCCSLARGARGGAHTFKYEPAKATASSGAFDKKHYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccgcgtgcctggagccgctcgggctcgcgctcggcttcgcgggctcgctgctc
gtgatggtcgcgtgcgcgctcccgatgtggaaggtcaccgcgttcatcgactccaacatc
gtggtggcgcagacgctgtgggacgggctgtggatgtcgtgcgtggcgcagagcacgggc
cacgtgcagtgcaaggtgcacgagtccgtgctggcgctcacgcgcgacctgcagacggcg
cgcgcgctcacggtggtggccgccgtgctggccgtggccgcgctctcggtgacggtggcc
ggcgcgcagtgcaccacctgcatccgagcggaggcggtgaagcggcgcgtggtgggcgtc
gggggcgcgctgcacgcggccggcgggttgtcggtgctcgtgccgctctgctggatggcg
cacggcatcatcgtggacttccacgacccgcgcgtgccgccgtccaagaagcgcgagatc
ggggccgcgatctacatcggctgggccggggccgcgctgctgctgctcggcggcgcgctg
ctgtgctgctccttggcccgcggcgcgcgggggggcgcgcacacgttcaagtacgagccc
gccaaggccaccgcgtccagcggggccttcgacaagaagcactacgtctga
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