Pseudoliparis swirei (Mariana hadal snailfish): 130205550
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Entry
130205550 CDS
T09868
Symbol
pum3
Name
(RefSeq) pumilio homolog 3 isoform X1
KO
K14844
pumilio homology domain family member 6
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pswi03019
]
130205550 (pum3)
03009 Ribosome biogenesis [BR:
pswi03009
]
130205550 (pum3)
Messenger RNA biogenesis [BR:
pswi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
130205550 (pum3)
Ribosome biogenesis [BR:
pswi03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
130205550 (pum3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPL
PUF
PUF_NOP9
Endonuc_BglI
Msl2-3_C
Motif
Other DBs
NCBI-GeneID:
130205550
NCBI-ProteinID:
XP_056288975
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All DBs
Position
15:complement(7586616..7600187)
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AA seq
663 aa
AA seq
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MLLRLLINRPRNIMETKSKKNSFPKDGKKFSQKGKDSMGTKLGSKPGGKKPYKPLNNAEK
KSRSMGGAGSKEEHKFPSSKAGMGPQKRTMQFKAKNEESEGPVAKRMKKGEFDPKTKELT
EEELKKNRQQIKKDLKNSRQHAERKDMFQIICQCKKLWGDLRKKKCDNELKKKLMTELHD
LVRGNIKQMAFAHDSVRVLQCFIQFGSHEQRQEVFEELKGDVVDLCKSQYGKHVVKKLLM
YGNKELVAVVMKTFRGHVRTMLRHATASSIIEYAYNDKAVLAQRLMLTQGLYGNTFTICK
SSVCKTIEKVAEANPDKLNNIIDEMKQILTPMAQKEQVIKHSLVHKVFLDFFLFAPDKPK
TEMIESIRESVVYMAHTHDGARVAMHCFWHGTAKDRKVIIKTMKTYIVKFATGEFGHLVL
LAMFDCVDDTKLVKQAVLSEILLSLDEVIGNKYGKKVLLYLLSPRDPAHLLPEIIKVLQQ
GDGNTHSKKDMAVRRKELLEVVSPPLLEHLRDNAATMVTDKASSVTISDILASACGDLRP
AMTAVAQLANHELVPGGTNGELHMAEHPAGHLVLKWLMEQDTTLAEAGKEERFGRILVDT
VGTDNLKTWVKVNRGAMVLCSLLKSYDKSVAAEVKVALESIKAELSSIGNNKGAEILLEN
LNK
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcaggctcttaataaataggccgaggaacatcatggagactaaatcaaaaaag
aactcttttccaaaagatggaaagaagttctcgcagaaaggaaaagattccatggggacc
aaacttggcagtaagccgggtggtaagaagccctacaaacctttaaacaacgcagagaaa
aagagcaggtcgatgggtggcgctggcagcaaggaagaacacaaattcccttcctccaaa
gctggcatggggccgcagaaaaggacaatgcaatttaaagcaaaaaatgaagagagcgaa
ggtccagtggccaagaggatgaagaaaggcgagtttgatccgaaaacaaaggagctgacg
gaggaggagctcaagaagaataggcagcaaataaagaaggatctgaaaaatagcagacag
catgcggagaggaaggacatgttccagatcatttgtcagtgcaaaaaactgtggggagac
ctcaggaagaagaagtgcgacaacgagttgaagaagaaactgatgacggagcttcacgat
cttgtccgtgggaacatcaaacagatggcttttgctcacgactctgtgagagtgctgcag
tgtttcatccagtttggcagccacgagcagagacaagaagtgtttgaggagctcaaaggc
gacgtcgtcgatttgtgtaagtcgcagtacggcaaacacgtggtgaagaaactgctgatg
tacgggaacaaggagctggtggcggttgtgatgaaaacattcaggggtcacgtgcgtacg
atgcttcgccacgctaccgcatcgtccatcatcgagtacgcctacaacgacaaagccgtg
ctcgcacagagacttatgctcacccaggggctgtacggaaacaccttcaccatctgcaag
tcatctgtgtgcaaaaccatcgagaaagtcgcagaggcgaacccggacaagctgaacaac
atcattgacgagatgaaacagatcctcacacccatggctcagaaagaacaagtgatcaaa
cactctctggtccacaaagtctttctggacttcttcctgttcgcacccgacaaaccgaaa
acggaaatgattgagtcgatcagagagtctgtcgtctacatggctcacacacacgacgga
gcacgagtggcaatgcactgtttttggcacgggacggctaaggacagaaaagtaattatc
aaaactatgaaaacctacattgtaaagtttgccacgggggagttcggtcacctagttctt
ctggccatgttcgactgcgtggacgacaccaagcttgtcaaacaggctgttctttcagag
atcttgctgtctcttgatgaggtcatcggtaataaatatggtaagaaggttttgctgtac
ctgctgagtcccagagaccctgctcacctgctgccggagatcatcaaggtgctgcagcaa
ggagacggaaacacacacagtaaaaaggacatggcagttcggaggaaggagctgctggaa
gtcgtctctccaccgttgctggaacatctccgtgacaacgctgccactatggtgacagac
aaggcatccagcgtcaccattagtgacatcctggcttcagcctgtggggacctgcggccc
gccatgacagccgttgcgcagctagccaatcacgagttggtaccaggagggaccaacgga
gagcttcacatggcggagcatccagcaggacacctggtgctgaaatggctcatggagcag
gacacaacgctggcagaggccggcaaggaagagcggttcggaaggatactggtggataca
gtgggaacagacaatctgaagacctgggtcaaggtcaacagaggcgccatggtgctctgc
agcctcctgaagagctacgacaagtctgtggcagcagaggtgaaggtggcgctggagtcc
atcaaagcagagctcagcagcatcggcaacaataaaggagctgaaatcctgctcgagaat
ctgaacaagtag
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integrated database retrieval system
