Pseudoliparis swirei (Mariana hadal snailfish): 130205561
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Entry
130205561 CDS
T09868
Symbol
lamp1b
Name
(RefSeq) lysosome-associated membrane glycoprotein 1b
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi03272
Virion - Hepatitis viruses
pswi03273
Virion - Lassa virus and SFTS virus
pswi04140
Autophagy - animal
pswi04142
Lysosome
pswi04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
130205561 (lamp1b)
03272 Virion - Hepatitis viruses
130205561 (lamp1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130205561 (lamp1b)
04142 Lysosome
130205561 (lamp1b)
04140 Autophagy - animal
130205561 (lamp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pswi04131
]
130205561 (lamp1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pswi04147
]
130205561 (lamp1b)
04090 CD molecules [BR:
pswi04090
]
130205561 (lamp1b)
Membrane trafficking [BR:
pswi04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
130205561 (lamp1b)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
130205561 (lamp1b)
Other autophagy associated proteins
RNautophagy/DNautophagy
130205561 (lamp1b)
Exosome [BR:
pswi04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
130205561 (lamp1b)
CD molecules [BR:
pswi04090
]
Proteins
130205561 (lamp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
130205561
NCBI-ProteinID:
XP_056288996
LinkDB
All DBs
Position
2:complement(8884042..8889682)
Genome browser
AA seq
247 aa
AA seq
DB search
MTRVGGVQSWCLGVTLQLVLAVVLHQGFATVAPPTTAPHKDPGRPEEGHYTVTRSNGTAC
LLASMGLQLNISFNSLSQNKTVQDVVNLQPNLTKTSGSCDSDRASLQLSTDAEKTNLTFT
FTLNTTSNKYHLSEVSLSADWPDMKEPLSANNSGLDELRGTFGFSYMCHEKQTLRLAPDW
SVNTFQLQVQPFGLTGDQFGAAEVCQLDEDDMLIPIIVGAALAGLVLIVLLAYFIGRKRS
QAGYQTI
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgtcggcggcgtccagtcgtggtgcctgggagtgacgttacagctggtgtta
gctgtcgtcctgcaccagggcttcgccacagttgccccgcccacgactgcgccgcacaaa
gaccccggaagacctgaggaaggacactacacggtcaccagaagcaacggtactgcctgt
ttactggcatccatgggtctccagctcaacatctccttcaactctctctcccaaaataag
acagtgcaggatgttgtgaaccttcagcccaatttgacaaagacctctggatcgtgtgac
tcggacagagcctccctgcagctctcaacagatgcagagaagaccaacctcacctttacc
ttcactctgaataccacgtccaataagtaccacctgagtgaagtgtctctgtcagcagac
tggccagacatgaaagagcccttgtcagccaataactccggtctggacgagctgcggggc
accttcgggttctcgtacatgtgccacgagaagcaaactctgcgcttggccccggattgg
tccgtcaacaccttccagctgcaggtgcagccattcggcctcaccggagatcagttcgga
gcagccgaggtatgccagttggatgaggacgacatgttgatccccatcatagtcggagca
gctttagccggtctcgtcctcatcgtgctcttggcttacttcatcggtcggaagaggagc
caagctggataccagaccatctga
DBGET
integrated database retrieval system
