Pseudoliparis swirei (Mariana hadal snailfish): 130205597
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Entry
130205597 CDS
T09868
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04060
Cytokine-cytokine receptor interaction
pswi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130205597
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
130205597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pswi04052
]
130205597
Cytokines and neuropeptides [BR:
pswi04052
]
Cytokines
Transforming growth factors (RSTK binding)
130205597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
130205597
NCBI-ProteinID:
XP_056289038
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Position
15:9534989..9536617
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AA seq
408 aa
AA seq
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MKGLAVDYSVVLLLVDLFLGVAAVQPFPGMRPDALLSGMSAGSRRTARRQQASQLSLYMM
HLYRTMRTEDRESTPAASVNPIRTEDNPGLHASDSVISLVAKSCQQIGKRWSVTFDMSSM
SASDNIQLAELRIRLTPFTESPAASVDIYHSHGGRCSDTHCPENRQFLGRVVAHPSSMVS
ASSWKVFNMTEMLYRWLQREHRAQRMGEAEAEVMEQEGVGHPTAHRVMMVVFSRQLSNSR
RMPTLIRTAEHSKYVSLDREGAAAASGPRPRTRRSQRDRRPTHDQRRQRVAGAAPARRPT
EEQKGPLCRKVDMWVDFATLGWSDWIVYPKQYNAYRCEGSCPTPVDETFSPTNHAYMQSL
LKLHHPDKVPCLSCVPTHLSPLSMLYFENGKMVTRHHENMVVEECGCH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaagggactcgcagtggattactctgtcgtgcttcttctggtggatttgtttctgggt
gtcgccgccgtgcagccctttcccgggatgcgccctgacgcactgctcagtgggatgagc
gcgggctccagacgcaccgcgcgcaggcagcaagccagccagctgtccctctacatgatg
cacctctaccggaccatgcgcaccgaggaccgggagagcactccggctgccagcgtgaac
cccatcaggacggaggacaaccccggtctgcacgcctccgactctgtgatcagcctggtc
gctaagagctgccagcagattggcaagaggtggtccgtcacctttgacatgtcctccatg
tctgcaagtgacaacatccaactggcggaactccgcatccggctgacccccttcaccgag
tctcccgcagcctcggtggacatctaccactcccacgggggccgctgctcggacacgcac
tgccccgagaaccggcagttcctgggccgcgtggtggcccatcccagctcgatggtctcc
gcttcctcctggaaggtgttcaacatgacggaaatgctctaccgctggctgcagcgggag
caccgtgcgcagaggatgggggaggctgaggctgaggtgatggagcaggagggagtcgga
caccctacagctcaccgggtcatgatggtggtcttctcaagacaactctccaacagccgg
cgaatgccgacactcatccgcacggcagagcactccaagtacgttagcctggaccgcgag
ggagcggcggccgcctccggtccccggccgaggacccgcaggtcccagagggaccggagg
ccgacccacgaccagcggcggcagagagtggctggagccgctcctgcccgcaggcccaca
gaggagcagaagggtcccctctgcaggaaggtggacatgtgggtggactttgcgacgctc
ggctggagcgattggatcgtctatcccaaacagtacaacgcctaccgctgtgaagggagc
tgtcccacaccagtcgatgagaccttcagcccaaccaaccacgcatacatgcagagcctc
ctgaagcttcaccacccagacaaggtgccgtgcctttcctgtgtgccaacgcacctgtca
ccgctttccatgttgtacttcgagaatgggaagatggtcacgaggcatcacgagaacatg
gtggtggaggagtgcggctgccactga
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