Pseudoliparis swirei (Mariana hadal snailfish): 130205647
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Entry
130205647 CDS
T09868
Symbol
lmnb1
Name
(RefSeq) lamin-B1
KO
K07611
lamin B
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Pathway
pswi04210
Apoptosis
pswi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
130205647 (lmnb1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130205647 (lmnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pswi04812
]
130205647 (lmnb1)
Cytoskeleton proteins [BR:
pswi04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
130205647 (lmnb1)
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GFIT
Motif
Pfam:
Filament
LTD
Cortex-I_coil
Motif
Other DBs
NCBI-GeneID:
130205647
NCBI-ProteinID:
XP_056289111
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Position
15:2119083..2132755
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AA seq
581 aa
AA seq
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MATATPTGQRSTCGTPMSSNRITRLQEKQQLRDLNDRLAVYINKVRSLESENDVLHLQIN
EKEDVRSREVTGLKALYETELADARRSLDESSKERAWLQIELGKIQSEHQQLQQNYNKKD
SEAAGGQARLKDLEAQFHCKEAALATALAESRGLQAALAERRERLQELEAGLERAKKNLA
DETLLRIDFENRCQSLTEELSFRQSMIEEEVKETRQRLETQLVEVDSGRKVEYESKLTQA
LTDLRAQNEEQIGLYRENMESTYVTKVEDLHRLSEMNGASASSAREELREAGLRTESLSA
QLAGMQKETRGWRERVAELEAAMSQEKDKSRKLLAERDRDLAALRLQMQRQLDDYVQLLD
VKLALDMEINAYRKLLEGEEERLKLSPSPSARVTVSRTSSSSRSVQTSKGKRKRLEVEEQ
EASSSVSIAHSASALGPVSVDEIDTDGKFICLHNNGDEDQAMVGYEMMKTIGKDTATYKF
TPKFVLKGGHKVTVWACDAGVSSKPPTDLVWKSHSSWGAGVDVQVGLVNPQGENVAKRIT
TYKTAIEEEEEEEDDGVEAVDEELFHQKGDPRTAKRGCSVM
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccgctactccgaccggtcagaggagcacgtgcggcactccgatgagctcaaac
aggatcacccggctgcaggagaagcagcagctccgggacctcaacgatcgcctggcggtt
tacatcaacaaggtccgcagcttggagtcggagaacgacgtcctccacctgcaaatcaac
gagaaggaggacgtgaggagccgcgaggtgaccggcctgaaagccctctacgagacggag
ctagcggacgcccggaggagcctggacgagtcctccaaggagcgggcctggctgcagatc
gagctggggaagatccagagcgagcaccagcagctccagcagaactacaacaagaaggac
tctgaggcggcgggggggcaggcccggctgaaggacctggaggcgcagttccactgcaaa
gaggcggcgctggccacggcgctggccgagagcagaggcctgcaggccgcgctggccgag
cggcgggagcggctgcaggagctggaggccgggctggagcgcgccaagaagaacctggcg
gacgagacgctgctgcgcatcgactttgagaaccgctgccagagtctgacggaggaactc
agcttccgtcagagcatgatcgaagaggaggtgaaggagacccggcagcggttggagacc
cagctggtggaggtggactccggccggaaggtggagtacgagtccaaactgactcaggcc
ttgacggacctgagggcccaaaacgaagagcagatcggcctctacagggagaacatggag
agcacctacgtcaccaaggtggaggacctgcatcggctgtctgagatgaacggcgcgtcg
gccagctcggcccgagaggagctgcgtgaggccggcctgaggaccgagagcctcagcgcc
cagctggcagggatgcagaaggagactcgtggctggcgcgagcgcgtcgccgagctggag
gcggcgatgtctcaggagaaggacaagagccgcaagctgctggcggagcgagaccgcgac
ctggcggcgctccggctccagatgcagcggcagctggacgactacgtgcagctgctggac
gtcaagctggcgctggacatggagatcaacgcctaccgcaagctgctggagggggaggag
gagcggctgaagctgtctcccagcccgtcggctcgcgtcacggtgtctcgaacctcgtcc
agcagccgcagcgttcagacctccaagggcaagaggaagcggctggaggtggaggagcag
gaggccagcagctcggtgtccatcgcgcactccgcctcggccctggggcccgtcagcgtg
gacgagatcgacaccgacgggaagttcatctgcctccacaacaacggagacgaggaccag
gcgatggtcggttacgagatgatgaagacgatcggaaaggacaccgccacctacaagttc
acgcccaaattcgtcctgaagggcggccacaaggtcacggtgtgggcgtgcgatgccggc
gtgagctccaagccgcccacagacctggtgtggaagagccactcctcctggggggccggg
gtggacgtccaggtggggctcgtcaaccctcagggagagaatgtggcaaagagaatcaca
acatacaagacggcaattgaagaagaagaagaggaggaggacgatggcgtggaggccgtc
gatgaagaactcttccaccagaagggagaccctcgcaccgccaagaggggctgctccgtc
atgtga
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