Pseudoliparis swirei (Mariana hadal snailfish): 130205655
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Entry
130205655 CDS
T09868
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
pswi
Pseudoliparis swirei (Mariana hadal snailfish)
Brite
KEGG Orthology (KO) [BR:
pswi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pswi02000
]
130205655 (tmc2a)
03037 Cilium and associated proteins [BR:
pswi03037
]
130205655 (tmc2a)
Transporters [BR:
pswi02000
]
Other transporters
Pores ion channels [TC:
1
]
130205655 (tmc2a)
Cilium and associated proteins [BR:
pswi03037
]
Other cilia and associated proteins
Stereociliary proteins
130205655 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
130205655
NCBI-ProteinID:
XP_056289126
LinkDB
All DBs
Position
15:complement(3103712..3119643)
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AA seq
997 aa
AA seq
DB search
MRCTLYTDDTPVESGVTRGSRHGDGAAEIPELGIWWGAEAEERRRDDRAGAAQDARVEIE
VDSDPSGSDDEGAKKKPNRRQGAGRGGAKGRGRGRKPPSDGEDEDEDEEDEAPRGRRGAN
NKQKPPAKKRGGRNQDEDEDEGPKRKRKGAANRKRGGKAQDSDEEESDAGKGRKGKKGGG
RKGGKQAEDGKGKKGDAKGKDAKEKDDDKDKKKKKKKDDSSSNSNSNSDEEDSMSEGEMA
RLMEEVEEKKKLITTIRNQPWRMQRRLLNLKEAQEFVDKFEGALGKGKGRKWFAYKVMMK
KKWIKFQRDFENFRTACIPWERKIKEVESHFGSSVASYFIFLRWMYGMNLVLFGFTFGLV
VIPEVLMGLPYGSIARKTVPRAQQDTAQDYSVLMDFQGYCKYSVLFYGYYNNQRTIGLLK
FRLPLSYLMVGIGTFGYSLMVVIRTMAKNADVGGGDGDEGEFTFAWKMFTSWDYLIGNSE
TADNKFASITTSFKESIVDEQENQKDENIHLRRFLRVMANFLITCSLGGSGYLIYFVVKR
SQEFAGRTDLSWYEKNELELIMSLLGLVCPPLFETIAEMEDYHPRIALKWQLGRIFALFL
GNLYTFLFALFDDVNNKLEQEDSIKNASLWAMKEYYANYTFMLNDTDSTPPPMPPADIIR
GPCWETAVGIEFVKLTVSDIQVSYLTILIGDFARAVIVRFLNYCWCWDLEAGFPSYGEFD
ISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMATNVPHERVFKASKS
NNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKVKMFDVIMETIDLDLPAFLGTI
FGYAANPGLIIPAVLLMVLAIYYLNSVAEAYQNANLELKKKMQMTRDEEKNRRNNMDSTN
QVMKDLEDLLPNRASTPAAPPPRPEKMAELEAKPTKTKPGSAGKDVNLQKDVTLASPNPN
ARAPVSRPPGPRGAGPGAGPGPGPGRGRGRGGGPPPR
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgcgctgcaccttatataccgacgacacgcctgtggagagcggggtcacgcgcggcagt
cgtcatggcgacggcgccgccgagatacccgagttgggtatctggtggggagccgaggca
gaggagaggagacgagacgaccgggccggcgctgcacaggacgcccgagttgagatcgag
gttgacagtgatccgagtggcagtgatgacgagggcgccaagaagaaacccaacaggagg
cagggagctggaagaggaggcgcaaaaggccgaggccgggggagaaaaccacccagtgac
ggcgaagacgaagacgaagacgaggaggacgaagctcccaggggacgaaggggggcaaac
aacaagcagaagccgcccgccaagaaacgcggggggcgcaatcaggacgaggacgaggac
gagggtcccaagaggaagaggaagggagccgccaatcggaagagaggaggcaaagctcag
gacagcgacgaggaggagagcgatgcggggaaggggaggaagggaaagaagggagggggg
aggaaaggagggaaacaggcggaggacggtaagggaaagaagggggacgccaaagggaag
gacgccaaagagaaggacgacgacaaggacaagaagaagaagaagaaaaaggacgacagc
tcatccaactccaactccaactccgacgaggaggactccatgtcggagggcgagatggcc
cggctgatggaggaggtggaggagaagaagaagctgatcaccaccatcaggaaccagccg
tggaggatgcagcggaggctcctcaacctgaaggaggctcaggagtttgtggataagttc
gagggcgctttgggcaaagggaaaggcaggaagtggtttgcctacaaagtgatgatgaaa
aagaaatggatcaagttccagagggactttgagaacttcagaacagcctgtatcccctgg
gagaggaaaatcaaagaagtggagagtcactttgggtcatctgtggcatcttacttcatc
ttcctgcgctggatgtacggcatgaacctggtgctttttggtttcacctttggactggtg
gtcatccccgaggttctgatgggccttccctacgggtccattgccaggaagacggtaccc
agagcccagcaggacaccgctcaggactactctgtcctcatggacttccagggctactgc
aaatactcggtcctgttctacggctactacaacaaccagcggaccatcggcctgctgaag
ttccggctgcctctgtcctacctcatggtcgggatcggcaccttcggctacagcctgatg
gtcgtgatccgcacgatggccaagaacgccgacgtcggcggcggcgacggagacgaaggc
gagttcacgttcgcctggaagatgttcaccagctgggattacctcatcggcaactcggag
accgccgacaacaaattcgcctccatcaccaccagcttcaaggagtccatcgtggatgag
caggagaaccagaaggatgagaacatccacctgcgcaggttcctcagggtcatggcgaac
ttcctgatcacctgcagcctcggcggcagcggctacctcatctacttcgtggtgaagagg
tcgcaggagttcgccggcagaaccgacctcagctggtacgagaagaacgagctggagctc
atcatgtctctgctgggcctcgtgtgtcctcctctgtttgagaccatcgctgagatggag
gactaccatccccgcatcgccctcaagtggcagctcggccgcatcttcgccctcttcctg
ggaaacctctacaccttcctgttcgccctgttcgacgacgtcaacaacaagctggaacaa
gaggactccattaagaacgccagcctgtgggccatgaaggagtactacgccaactacacc
ttcatgctcaacgacaccgactccaccccgccccccatgccccccgccgacatcatcaga
ggaccctgctgggagaccgccgtcggcattgagtttgtgaagctgacggtgtcggacatc
caggtgtcctacctgaccatcctgatcggggactttgcccgagcggtcatcgttcggttc
ctcaactactgctggtgctgggacctggaggcgggatttccgtcatatggagagtttgac
atcagcggtaacgtccttggactggttttcaaccaaggaatgatctggatgggtgcgttc
tacgctcccgggctggtgggcatcaacgtgctgcgcctcctcagctccatgtactaccag
tgttgggccgtcatggcaaccaacgtcccgcacgagagagtcttcaaggcctccaagtcc
aacaacttctacatggggctgctcctcctcatcctcttcctcagcctgctgcccgtggtc
tacaccatcatgacgctgccgccttcgttcgactgcgggcccttcagtgggaaggtgaag
atgttcgacgtgatcatggagacgatcgatctcgacctgccggccttcttggggacgatt
ttcggctacgcagcaaatccaggactcatcataccagctgtcctcctcatggtactggcc
atctactacctgaactcggtggctgaggcctatcagaacgccaacttggagctgaagaag
aagatgcagatgactcgggatgaagagaagaaccggaggaacaacatggacagcaccaac
caggtgatgaaggacctggaggacctgctgcccaaccgggcctccacgccagccgccccc
ccacccaggcctgagaagatggcggagctggaggcgaagccgacgaagacgaagcccggc
tcggccggtaaagacgtgaacctgcagaaggacgtgacgctggcgtcgcccaaccccaac
gcccgggcgccggtgagccggccgccggggcccagaggagccggaccgggagcgggaccg
ggaccgggcccggggcgcggccgtgggaggggggggggccctcctccgagataa
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